y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G208900.2 |
Family | GH14 |
Protein Properties | Length: 520 Molecular Weight: 58802.7 Isoelectric Point: 5.0332 |
Chromosome | Chromosome/Scaffold: 05 Start: 58960290 End: 58962546 |
Description | beta-amylase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 22 | 441 | 0 |
YVMLPLGVISNDNVFEDQPKMEKQLKELRAAGVDGVMVDVWWGIVESKGPKQYDWSAYRSLFALVHECGLKLQAIMSFHRCGGNVGDEVTIPLPQWVLDI GETDPDIFYTNRKGNRNKEYLTIGVDNQPLFDGRTAVQLYSDYMKSFREHMSDFIEAGPIIDIEVGLGPAGELRYPSYTGTQGWVFPGIGEFQCYDKYLE AEFKEAATGAGHPEWGLPDNAGEYNDTPGSTEFFGLNGTYMTEKGKFFLTWYSNKLINHGDEILDEANRAFLGCKVKLAAKVAGIHWWYKSPSHAAELTS GYYNLKDRDGYRPIARMLSRHYAIFNFTCLEMRDSEQRADAKCGPQGLVQQVLSGGWREEVEVAGENALSRYDSNGYNQMLLNARPSGISREGLPKQIMY GVTYLRLSDELLKDKNFKIF |
Full Sequence |
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Protein Sequence Length: 520 Download |
MQAPTAPSTY NEKILANYVP VYVMLPLGVI SNDNVFEDQP KMEKQLKELR AAGVDGVMVD 60 VWWGIVESKG PKQYDWSAYR SLFALVHECG LKLQAIMSFH RCGGNVGDEV TIPLPQWVLD 120 IGETDPDIFY TNRKGNRNKE YLTIGVDNQP LFDGRTAVQL YSDYMKSFRE HMSDFIEAGP 180 IIDIEVGLGP AGELRYPSYT GTQGWVFPGI GEFQCYDKYL EAEFKEAATG AGHPEWGLPD 240 NAGEYNDTPG STEFFGLNGT YMTEKGKFFL TWYSNKLINH GDEILDEANR AFLGCKVKLA 300 AKVAGIHWWY KSPSHAAELT SGYYNLKDRD GYRPIARMLS RHYAIFNFTC LEMRDSEQRA 360 DAKCGPQGLV QQVLSGGWRE EVEVAGENAL SRYDSNGYNQ MLLNARPSGI SREGLPKQIM 420 YGVTYLRLSD ELLKDKNFKI FKTFVKKMHA DQDYCADLGM YNHQIGPLER SKPKLVMEDL 480 LEATKPMEPF PWGEETDMKV DDFDGVLANL IRKLFSLFK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02705 | PLN02705 | 3.0e-122 | 18 | 451 | 436 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-149 | 19 | 453 | 439 | + beta-amylase; Provisional | ||
PLN02905 | PLN02905 | 1.0e-149 | 18 | 451 | 438 | + beta-amylase | ||
PLN02803 | PLN02803 | 1.0e-165 | 19 | 448 | 433 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 4 | 519 | 517 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK30294.1 | 0 | 1 | 519 | 1 | 514 | AF353207_1 beta-amylase [Castanea crenata] |
EMBL | CAN70833.1 | 0 | 1 | 500 | 1 | 499 | hypothetical protein [Vitis vinifera] |
Swiss-Prot | O64407 | 0 | 8 | 501 | 2 | 495 | AMYB_VIGUN RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
RefSeq | XP_002281003.1 | 0 | 1 | 500 | 1 | 499 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327920.1 | 0 | 8 | 518 | 5 | 517 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uko_D | 0 | 8 | 501 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 8 | 501 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_B | 0 | 8 | 501 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_A | 0 | 8 | 501 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_D | 0 | 8 | 501 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777976 | 493 | 10 | 501 | 0 |
HO803971 | 396 | 97 | 492 | 0 |
HO782669 | 385 | 114 | 498 | 0 |
GT625519 | 284 | 96 | 379 | 0 |
CV290805 | 309 | 140 | 448 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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