Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G218000.1 |
Family | GH3 |
Protein Properties | Length: 780 Molecular Weight: 84198.1 Isoelectric Point: 7.5963 |
Chromosome | Chromosome/Scaffold: 05 Start: 60082707 End: 60086573 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 92 | 341 | 0 |
SVSRLGIPKYEWWSEALHGVSNVGPGTKFTSLVPGATSFPQVILTAASFNTSLYEAIGKVVSTEARAMYNVGLAGLTYWSPNINIFRDPRWGRGQETPGE DPLLASKYGSSYVKGLQQTDGGDPSRLKVAACCKHYTAYDVDNWKGIERYTFDAVVTQQDLDDTFQPPFKSCVIDGNVASVMCSYNKVNGKPTCADPDLL AGVIRGQWKLNGYIVSDCDSVDVLFKNQHYTKTPEEAAAKVILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 780 Download |
MTTLFSSVLQ NRAPKVSVFI FFLISLHCLS LISVRVLAQT SPVFACDATK DPQVASYGFC 60 DTKLGTDARV ADLVHRLTLQ EKILFIVNSA GSVSRLGIPK YEWWSEALHG VSNVGPGTKF 120 TSLVPGATSF PQVILTAASF NTSLYEAIGK VVSTEARAMY NVGLAGLTYW SPNINIFRDP 180 RWGRGQETPG EDPLLASKYG SSYVKGLQQT DGGDPSRLKV AACCKHYTAY DVDNWKGIER 240 YTFDAVVTQQ DLDDTFQPPF KSCVIDGNVA SVMCSYNKVN GKPTCADPDL LAGVIRGQWK 300 LNGYIVSDCD SVDVLFKNQH YTKTPEEAAA KVILAGLDLN CGSFLGQHTE AAVKAGLLNE 360 SAIDKAVTNN FATLMRLGFF DGDPSKQPYG KLGPKDVCTP EHQELAREAA RQGIVLLKNS 420 PGSLPLSPTA IKTLAVIGPN ANVTKTMIGN YEGIPCKYTT PLQGLTTSVA TNYVPGCTNV 480 ACGTAQVDDA KKAAASADAT VLVMGIDQSQ ERESFDRVSL LLPGQQPLLI TEVAKAAKGP 540 VILVIMSGGG FDISFAKNDD KITSILWVGY PGEAGGAAIA DVIFGYYNPS GRLPMTWYPQ 600 SYVDKVPMTN MNMRPDPSNG YPGRTYRFYT GETIYTFGDG LSYSKITHEL AKAPRLVSIP 660 LEEDHVCRSS ECKSVEAVEQ SCKNLAFDIH VRVQNRGKYG GSHTVFLFSS PPSVHNSPQK 720 HLLGFEKVSL TGKSETLVRF KVDVCKDLSV VDELGSRKVA LGQHLLHVGS LKHSLTVGI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 7.0e-52 | 414 | 644 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-62 | 49 | 478 | 450 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-68 | 87 | 369 | 287 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-77 | 28 | 744 | 802 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 18 | 779 | 781 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 11 | 779 | 6 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 7 | 779 | 194 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 37 | 779 | 26 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 41 | 779 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 5 | 779 | 1 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 128 | 742 | 91 | 696 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u48_A | 0 | 128 | 742 | 91 | 696 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u4a_B | 0 | 128 | 742 | 91 | 696 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u4a_A | 0 | 128 | 742 | 91 | 696 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3rrx_A | 1e-36 | 84 | 627 | 89 | 613 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |