Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G218000.3 |
Family | GH3 |
Protein Properties | Length: 632 Molecular Weight: 68277.7 Isoelectric Point: 7.1035 |
Chromosome | Chromosome/Scaffold: 05 Start: 60082746 End: 60085467 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 2 | 193 | 0 |
QVVSTEARAMYNVGLAGLTYWSPNINIFRDPRWGRGQETPGEDPLLASKYGSSYVKGLQQTDGGDPSRLKVAACCKHYTAYDVDNWKGIERYTFDAVVTQ QDLDDTFQPPFKSCVIDGNVASVMCSYNKVNGKPTCADPDLLAGVIRGQWKLNGYIVSDCDSVDVLFKNQHYTKTPEEAAAKVILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 632 Download |
MQVVSTEARA MYNVGLAGLT YWSPNINIFR DPRWGRGQET PGEDPLLASK YGSSYVKGLQ 60 QTDGGDPSRL KVAACCKHYT AYDVDNWKGI ERYTFDAVVT QQDLDDTFQP PFKSCVIDGN 120 VASVMCSYNK VNGKPTCADP DLLAGVIRGQ WKLNGYIVSD CDSVDVLFKN QHYTKTPEEA 180 AAKVILAGLD LNCGSFLGQH TEAAVKAGLL NESAIDKAVT NNFATLMRLG FFDGDPSKQP 240 YGKLGPKDVC TPEHQELARE AARQGIVLLK NSPGSLPLSP TAIKTLAVIG PNANVTKTMI 300 GNYEGIPCKY TTPLQGLTTS VATNYVPGCT NVACGTAQVD DAKKAAASAD ATVLVMGIDQ 360 SQERESFDRV SLLLPGQQPL LITEVAKAAK GPVILVIMSG GGFDISFAKN DDKITSILWV 420 GYPGEAGGAA IADVIFGYYN PSGRLPMTWY PQSYVDKVPM TNMNMRPDPS NGYPGRTYRF 480 YTGETIYTFG DGLSYSKITH ELAKAPRLVS IPLEEDHVCR SSECKSVEAV EQSCKNLAFD 540 IHVRVQNRGK YGGSHTVFLF SSPPSVHNSP QKHLLGFEKV SLTGKSETLV RFKVDVCKDL 600 SVVDELGSRK VALGQHLLHV GSLKHSLTVG I* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 7.0e-52 | 2 | 330 | 338 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-52 | 266 | 496 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 7.0e-55 | 2 | 221 | 224 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-73 | 1 | 596 | 644 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 4 | 631 | 646 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 2 | 631 | 145 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 2 | 631 | 337 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 2 | 631 | 139 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 2 | 631 | 110 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 2 | 631 | 147 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 1 | 594 | 105 | 696 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
PDB | 3u48_A | 0 | 1 | 594 | 105 | 696 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
PDB | 3u4a_B | 0 | 1 | 594 | 105 | 696 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
PDB | 3u4a_A | 0 | 1 | 594 | 105 | 696 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
PDB | 3ut0_D | 6e-31 | 22 | 479 | 157 | 613 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT550562 | 295 | 274 | 568 | 0 |
DT556104 | 293 | 87 | 379 | 0 |
DT563343 | 328 | 151 | 478 | 0 |
ES795716 | 284 | 108 | 391 | 0 |
ES795716 | 142 | 362 | 491 | 0.000000000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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