| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.005G231100.2 |
| Family | GH10 |
| Protein Properties | Length: 561 Molecular Weight: 62222 Isoelectric Point: 7.2029 |
| Chromosome | Chromosome/Scaffold: 05 Start: 61359133 End: 61362763 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH10 | 208 | 469 | 0 |
| QTKSGFPFGCGMNHYIVTDEAYRQWFASRFKVTSFTNEMKWYSTEKTRGVENYTVADAMVNFAEQNGISIRGHNVFWDNRVMQPKWVKELPPAELMKAAT RRLNSVVSRYAGRLIGWDVMNENLHFRFFEDKLGENASSMFYSMAYHLDPSMTLFMNEYNTIENSKDHTATACKYKEELEKILSFPGNAGLKAAIGLEGH FRDPKPNIAFMRSALDILGTMGLPIWLTEVDVGGGPDQAHNLEDILREGYSHPAVEGIIIFG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 561 Download |
| MKIAEASVLL ATCILLFSGH GVFSFSYDYS ATMECLAAPK RAQYGGGMIG FNQRTNGSTL 60 SSELGVSNDG LHNTTLSLKT VKLEKGNLYT FSAWVQISNG SESETVAVAF KASNGELVHG 120 GETMAKQGCW SLLKGGIGAE FTGVVEILLM SKAMEIRVDN VSLQPFTAKE WRSHQDKSID 180 KVRKKKVSFK VTYANGTAAD GALILILQTK SGFPFGCGMN HYIVTDEAYR QWFASRFKVT 240 SFTNEMKWYS TEKTRGVENY TVADAMVNFA EQNGISIRGH NVFWDNRVMQ PKWVKELPPA 300 ELMKAATRRL NSVVSRYAGR LIGWDVMNEN LHFRFFEDKL GENASSMFYS MAYHLDPSMT 360 LFMNEYNTIE NSKDHTATAC KYKEELEKIL SFPGNAGLKA AIGLEGHFRD PKPNIAFMRS 420 ALDILGTMGL PIWLTEVDVG GGPDQAHNLE DILREGYSHP AVEGIIIFGG PIAAGFKCMT 480 LANYDFEPTP VGEVVDKLIN EWKSGRRQVR TDSRGMSEIL LFHGDYRVKV SHPLINSSMS 540 INFKVTKETE NITVLLQFDA * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 3.0e-35 | 198 | 458 | 272 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 5.0e-43 | 210 | 462 | 271 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 7.0e-69 | 246 | 495 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU19437.1 | 0 | 8 | 560 | 13 | 581 | unknown [Glycine max] |
| RefSeq | XP_002313181.1 | 0 | 22 | 560 | 20 | 575 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313183.1 | 0 | 79 | 557 | 27 | 505 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 35 | 548 | 8 | 537 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 34 | 556 | 22 | 560 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v0n_A | 2e-24 | 210 | 469 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 2e-24 | 210 | 469 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0l_A | 2e-24 | 210 | 469 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0k_A | 2e-24 | 210 | 469 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1od8_A | 2e-24 | 210 | 469 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
