| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.005G231200.1 |
| Family | GH10 |
| Protein Properties | Length: 580 Molecular Weight: 64527 Isoelectric Point: 6.6144 |
| Chromosome | Chromosome/Scaffold: 05 Start: 61366973 End: 61374301 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH10 | 230 | 494 | 0 |
| QHQNKPGFPIGCAINKNILTNTPYQKWFTSRFTVTTFEDEMKWYSTEVSPGHEDYTSADALLSFAKQHNIAVRGHNVLWDDPKYQPGWLYSLSPAELSNA VHKRIVSVMSRYTGQLIAWDVVNENLHFSFFESKLGDQATPNFYRLAHAVDWSVPLFSNEYNTIEDSRDGAATPAKYLQKLRQIQGLTRNAKMGIGLESH FGTPNLAYMRASLDTLGATGLPIWLTELDVLSGPNQAKYLEQILMEAYSHPKVDGIVIWAAWKPQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 580 Download |
| MEISVLQKNN LITMLLILAC ADLLFSGFEA NALPYDYTAS IECLETPLKP LHGGGIILNP 60 ELNMGLKGWQ AFGDAKIEQR ELAGNKFVAV HARNRPTDSI SQKLYLQQET LYSFSAWIQV 120 SEGNEAVAAV FKSGTGFKHG GAVVAESKCW SMLKGGFTSD ATGPAELYFE SKNTSIEIWV 180 DSISLQPFTT EEWASHQDQN IKKVRKAKVR IQAIDKLGNP LSNATITIQQ HQNKPGFPIG 240 CAINKNILTN TPYQKWFTSR FTVTTFEDEM KWYSTEVSPG HEDYTSADAL LSFAKQHNIA 300 VRGHNVLWDD PKYQPGWLYS LSPAELSNAV HKRIVSVMSR YTGQLIAWDV VNENLHFSFF 360 ESKLGDQATP NFYRLAHAVD WSVPLFSNEY NTIEDSRDGA ATPAKYLQKL RQIQGLTRNA 420 KMGIGLESHF GTPNLAYMRA SLDTLGATGL PIWLTELDVL SGPNQAKYLE QILMEAYSHP 480 KVDGIVIWAA WKPQGCYRMC LTDNNFNNLA TGNVVDNLLR QWRSRAVSGL TDTRGFFEAT 540 LFHGDYEINI THPSSSAHSF VVVSTNASLQ SPLTFQVSV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 1.0e-36 | 233 | 507 | 307 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 5.0e-53 | 237 | 507 | 298 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 9.0e-76 | 270 | 515 | 271 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN10199.1 | 0 | 7 | 566 | 5 | 571 | endoxylanase [Carica papaya] |
| RefSeq | NP_195110.3 | 0 | 29 | 570 | 19 | 566 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | XP_002264605.1 | 0 | 25 | 566 | 17 | 560 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313180.1 | 0 | 41 | 552 | 1 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532418.1 | 0 | 27 | 577 | 15 | 566 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1tux_A | 1e-28 | 240 | 519 | 19 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1nq6_A | 1e-27 | 239 | 507 | 15 | 290 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1e0v_A | 1e-25 | 234 | 489 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 1e-25 | 234 | 489 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 1e-25 | 234 | 489 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
