Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G244300.1 |
Family | CE8 |
Protein Properties | Length: 341 Molecular Weight: 37334.7 Isoelectric Point: 9.1365 |
Chromosome | Chromosome/Scaffold: 05 Start: 62466754 End: 62469651 |
Description | pectinesterase 11 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 50 | 321 | 0 |
VDLSGGGDFVKIQDAIDAVPSNNKQVHFILVKPGTYREKIVVPADKPFITLSGTKPFDTIITWSEGGEIFRSATLTVLASNFVGRYLTIQNKFGTSGKAV AVRVSGDKAAFYGCRFLSYQDTLLDDAGKHYFNNCYIEGATDFICGNAASLYERCHLHSLSKGNGSITAQKRISPSENTGFTFLGCKVTGIGVAFLGRPW GAYSRVIFAHTYMSNVIVPQGWDDWQDQTKHSTVYYGEHKCYGPGADTSKRVQWSHRLSQDEAAPFLTKDMI |
Full Sequence |
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Protein Sequence Length: 341 Download |
MGCCGDAANI NIYSHAIHFM FILAIAVVPF GSLRAAKVDI DMSTAILLKV DLSGGGDFVK 60 IQDAIDAVPS NNKQVHFILV KPGTYREKIV VPADKPFITL SGTKPFDTII TWSEGGEIFR 120 SATLTVLASN FVGRYLTIQN KFGTSGKAVA VRVSGDKAAF YGCRFLSYQD TLLDDAGKHY 180 FNNCYIEGAT DFICGNAASL YERCHLHSLS KGNGSITAQK RISPSENTGF TFLGCKVTGI 240 GVAFLGRPWG AYSRVIFAHT YMSNVIVPQG WDDWQDQTKH STVYYGEHKC YGPGADTSKR 300 VQWSHRLSQD EAAPFLTKDM IGGRGWLRPT PKNFKRPSKL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 7.0e-97 | 31 | 328 | 315 | + pectinesterase | ||
PLN02634 | PLN02634 | 3.0e-97 | 50 | 330 | 298 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 7.0e-103 | 47 | 332 | 298 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 1.0e-117 | 48 | 329 | 299 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 0 | 40 | 328 | 289 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 41 | 340 | 39 | 338 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 41 | 340 | 57 | 356 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 42 | 340 | 1 | 299 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 18 | 335 | 4 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 41 | 336 | 37 | 332 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 50 | 330 | 11 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 50 | 330 | 7 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-17 | 53 | 322 | 13 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-17 | 53 | 322 | 13 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-17 | 53 | 322 | 13 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |