| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G016600.2 |
| Family | GT31 |
| Protein Properties | Length: 612 Molecular Weight: 69586 Isoelectric Point: 7.8814 |
| Chromosome | Chromosome/Scaffold: 06 Start: 3733421 End: 3737250 |
| Description | galactosyltransferase1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 378 | 560 | 0 |
| KRRMAVRRTWMQYPAVKSGTVAVRFFVGLHKNQIVNEELWSEIKTYGDIQLMPFVDYYGLITWKTIAICIFGAVSAKYVMKTDDDAFVRVDEVLGTISKE NVKHGLLYGLINYDAQPHRNADSKWYISPEEYPEKTYPPWAHGPGYVVSNDIAKAVYTKHKEGSLRMFKLEDVAMGIWIAEMK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 612 Download |
| MKKWLACVLM GSFIVILILR YNVMFKNPFS NNSLQQRIFV NTTDPRLKWV QQPTVSPVIQ 60 SPEAVNQVVL ADELVSGLFL DRNFSSEVQS SLFTWNEMKH IVNYSKGLPN ALEAVREARI 120 AWDNLMDIVA KKQQIEVNES SVDHKGKKCP YFLSKMDTKD FGDKGYKLRI PCGLIQGSAI 180 TIIGIPNGPS GSFRIDLTGE SVPEEPNPPI VLHYNVRLQG DKVTEDPVIV QNTWTTAQDW 240 GEEERCPSRN NKKVDDLKQC SEKVGKRDNR TRSKPYFPFK LGYLSVMTLR VGEEGFHMTV 300 DGKQITSFAC REGLEPWLVN EVRIFGDINL TSVLASGLPT SADLEHIDDL DALRTVPLPL 360 HRPLDLFIGV FSTANNFKRR MAVRRTWMQY PAVKSGTVAV RFFVGLHKNQ IVNEELWSEI 420 KTYGDIQLMP FVDYYGLITW KTIAICIFGA VSAKYVMKTD DDAFVRVDEV LGTISKENVK 480 HGLLYGLINY DAQPHRNADS KWYISPEEYP EKTYPPWAHG PGYVVSNDIA KAVYTKHKEG 540 SLRMFKLEDV AMGIWIAEMK KEGFKVYYKD EKRVYNEGCN DGFVVAHYQS PREMLCLWQK 600 LQAEGVVKCC N* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 6.0e-24 | 171 | 333 | 163 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 5.0e-26 | 165 | 333 | 169 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 4.0e-27 | 166 | 333 | 168 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 1.0e-35 | 378 | 560 | 193 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 0 | 1 | 610 | 636 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI22225.1 | 0 | 1 | 610 | 1 | 632 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002269607.1 | 0 | 1 | 610 | 1 | 633 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283624.1 | 0 | 1 | 610 | 1 | 636 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316134.1 | 0 | 1 | 610 | 1 | 629 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522444.1 | 0 | 1 | 610 | 3 | 629 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hl0_B | 0.0003 | 173 | 333 | 158 | 275 | A Chain A, Crystal Structure Of Full-length Toxascaris Leonina Galectin |
| PDB | 4hl0_A | 0.0003 | 173 | 333 | 158 | 275 | A Chain A, Crystal Structure Of Full-length Toxascaris Leonina Galectin |
