y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G073600.1 |
Family | GH14 |
Protein Properties | Length: 590 Molecular Weight: 65165.5 Isoelectric Point: 5.2904 |
Chromosome | Chromosome/Scaffold: 06 Start: 29417549 End: 29420971 |
Description | beta-amylase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 125 | 545 | 0 |
FVMMPLDSVTNGNTVNRKKAMNASLHALKSAGVEGIMIDVWWGLVEREAPGAYNWGGYTELLDMAKKHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVREE MEKDSDLAYTDQWGRRNYEYVSLGCDSLLVLKGRSPVQCYADFMRAFKDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEENGIWKFPGIGAFQCYDKYML SSLKAAAEAAGKPEWGSTGPTDAGHYNSWPEDTPFFKKDGGGWNSQYGEFFLSWYSQILIEHGERILSSASSVFEATGVKISVKVAGIHWHYGSRSHAAE LTAGYYNTRFRDGYLPVAQMVARYGAVFNFTCIEMRDHEQPQDALCAPENLVRQVGLATKEAQVPLAGENALPRYDESAHEQILKASSLNIDGSSNDREM CAFTYLRMNPSLFQPDNWRRF |
Full Sequence |
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Protein Sequence Length: 590 Download |
MAMNLGHQIG TLSGKQIPTE FAAGEQPSST TASPSAVWKS PAGNLRSNSP QENASPPMLT 60 PPLTPNSAGE WSYLINLPML RPDLSVACQA FATSSPLEMT EEEVAGTAEW TDGGRKDEKK 120 GVSVFVMMPL DSVTNGNTVN RKKAMNASLH ALKSAGVEGI MIDVWWGLVE REAPGAYNWG 180 GYTELLDMAK KHGLKVQAVM SFHQCGGNVG DSCTIPLPKW VREEMEKDSD LAYTDQWGRR 240 NYEYVSLGCD SLLVLKGRSP VQCYADFMRA FKDNFKHLLG DTIVEIQVGM GPAGELRYPS 300 YPEENGIWKF PGIGAFQCYD KYMLSSLKAA AEAAGKPEWG STGPTDAGHY NSWPEDTPFF 360 KKDGGGWNSQ YGEFFLSWYS QILIEHGERI LSSASSVFEA TGVKISVKVA GIHWHYGSRS 420 HAAELTAGYY NTRFRDGYLP VAQMVARYGA VFNFTCIEMR DHEQPQDALC APENLVRQVG 480 LATKEAQVPL AGENALPRYD ESAHEQILKA SSLNIDGSSN DREMCAFTYL RMNPSLFQPD 540 NWRRFVAFVK KMNEGKDSRR CLEQVEREAE HFVNVTEPFV QEAALALMP* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 6.0e-138 | 10 | 553 | 549 | + beta-amylase | ||
PLN02161 | PLN02161 | 2.0e-141 | 120 | 553 | 444 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-177 | 122 | 557 | 440 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 588 | 588 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 113 | 560 | 448 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 1 | 588 | 1 | 575 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 588 | 1 | 569 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 2 | 588 | 3 | 572 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 3 | 588 | 1 | 561 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 1 | 588 | 1 | 573 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 122 | 553 | 6 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0 | 122 | 553 | 10 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgb_A | 0 | 122 | 553 | 10 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xg9_A | 0 | 122 | 553 | 10 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xfy_A | 0 | 122 | 553 | 10 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 408 | 180 | 587 | 0 |
HO826564 | 408 | 178 | 585 | 0 |
HO798206 | 346 | 242 | 587 | 0 |
DT555349 | 320 | 209 | 528 | 0 |
DY279190 | 348 | 241 | 588 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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