Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G079400.1 |
Family | GH17 |
Protein Properties | Length: 362 Molecular Weight: 39675.1 Isoelectric Point: 6.685 |
Chromosome | Chromosome/Scaffold: 06 Start: 30531284 End: 30533273 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 338 | 0 |
IGVCYGMLGNNLPNSWEVIQLYKSNNIRRLRLYDPNQQALQALRGSNIEVILGVPNDQLQNLADPSKAQSWVQSNVVAYWPSVRFRYIAVGNEVPPSSWL AQFVLPALVNVFNAVRSIGLESQIKVSIAIDMTLIGVSYPPSTGAFRGDVRSYLDPIIGHLAWARTPLLANIYTYFSYSGNPRDISLPYALFTSPSPIIW DQGRGYQNLFDAMLDSLYSALEKAGQGGLEVVVSESGWPSAGGFGTSVDNAATYLSNLIRHVQGGTPKRPGKAIETYLFALFDENSKPGPELERHFGLFS PNKQPKYQLHF |
Full Sequence |
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Protein Sequence Length: 362 Download |
MAIFSTSMAA MLLLGLFAAN LDPTAAQIGV CYGMLGNNLP NSWEVIQLYK SNNIRRLRLY 60 DPNQQALQAL RGSNIEVILG VPNDQLQNLA DPSKAQSWVQ SNVVAYWPSV RFRYIAVGNE 120 VPPSSWLAQF VLPALVNVFN AVRSIGLESQ IKVSIAIDMT LIGVSYPPST GAFRGDVRSY 180 LDPIIGHLAW ARTPLLANIY TYFSYSGNPR DISLPYALFT SPSPIIWDQG RGYQNLFDAM 240 LDSLYSALEK AGQGGLEVVV SESGWPSAGG FGTSVDNAAT YLSNLIRHVQ GGTPKRPGKA 300 IETYLFALFD ENSKPGPELE RHFGLFSPNK QPKYQLHFGG GRHWDIASEE YNGTFPLKSD 360 M* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 57 | 330 | 285 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-163 | 28 | 338 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP87281.1 | 0 | 6 | 361 | 16 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABG49448.1 | 0 | 6 | 361 | 16 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABK96486.1 | 0 | 5 | 361 | 12 | 372 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ACZ74626.1 | 0 | 11 | 361 | 21 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
RefSeq | XP_002314934.1 | 0 | 11 | 361 | 2 | 356 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 27 | 338 | 1 | 315 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
PDB | 3f55_C | 0 | 27 | 338 | 1 | 315 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
PDB | 3f55_B | 0 | 27 | 338 | 1 | 315 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
PDB | 3f55_A | 0 | 27 | 338 | 1 | 315 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
PDB | 3em5_D | 0 | 27 | 338 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |