| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G087900.3 |
| Family | CBM57 |
| Protein Properties | Length: 584 Molecular Weight: 63468.4 Isoelectric Point: 9.5264 |
| Chromosome | Chromosome/Scaffold: 06 Start: 32287790 End: 32293708 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 170 | 319 | 7.1e-25 |
| DYSGDHWGGDRFWHPIRTFGKNVDAPRSTESGIKKASTVPNFYPEALYQSAVVSTDSKPDLAYTMDVDPNKNYSIWLHFAEIDATITSAGKRVFDVLING GTVFENVDVVGMSGDRYTALVLNTTVALSGRTLTITLHPKKGNHAILTAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 584 Download |
| MLRFTLLWLL VFLFASISSS SARPAPYAMR ISCGARQNIR TPPTYTRWYK DFAYTGGIPA 60 NATAPSHITP PLKTLRYFPL SEGPENCYII NRVPKGHYSV FAEALVFLLD GSVSICFHST 120 GRGDPTIISI EILQIDEKAY YFGPEWGRGV ILKTTSRLTC GTSKPKFDED YSGDHWGGDR 180 FWHPIRTFGK NVDAPRSTES GIKKASTVPN FYPEALYQSA VVSTDSKPDL AYTMDVDPNK 240 NYSIWLHFAE IDATITSAGK RVFDVLINGG TVFENVDVVG MSGDRYTALV LNTTVALSGR 300 TLTITLHPKK GNHAILTAIE VFQVIVAESK TSPEEVRALQ ALKKSLGLPN RFGWNGDPCV 360 PKEHPWSGAD CHFDKSGGKW FIDGLGLGNQ GLRGSLPNEI SKLHHLQSIN LSGNSIHGVI 420 PSSLGTVTSL ETLDLSYNFL NGSIPESLGK LTALRRLNLN GNSLSGRVPS ALGGRLLNGA 480 SFNFTDNHGL CGIPGLPKCG PHLSAGAKVG IAFAVFLSLV LLVICSICWW KRRQNILRAQ 540 QIAAASRSAP YAKARTQSSH DIQMSRNPSR GRTASENGPS LLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 1.0e-9 | 385 | 499 | 118 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 1.0e-10 | 385 | 496 | 112 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 2.0e-15 | 160 | 315 | 160 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 2.0e-49 | 31 | 324 | 350 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 22 | 583 | 607 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 25 | 583 | 23 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 22 | 583 | 22 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002279791.1 | 0 | 29 | 583 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 29 | 583 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 583 | 1 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.000000000000001 | 373 | 506 | 628 | 755 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 3rgz_A | 0.000000002 | 385 | 472 | 399 | 486 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 3rgz_A | 0.00000004 | 392 | 473 | 454 | 535 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 3rgz_A | 0.0000005 | 404 | 472 | 394 | 462 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 3rgz_A | 0.000003 | 392 | 472 | 478 | 558 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
