| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G087900.5 |
| Family | CBM57 |
| Protein Properties | Length: 498 Molecular Weight: 54771.3 Isoelectric Point: 7.4337 |
| Chromosome | Chromosome/Scaffold: 06 Start: 32287790 End: 32293708 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 210 | 359 | 5.3e-25 |
| DYSGDHWGGDRFWHPIRTFGKNVDAPRSTESGIKKASTVPNFYPEALYQSAVVSTDSKPDLAYTMDVDPNKNYSIWLHFAEIDATITSAGKRVFDVLING GTVFENVDVVGMSGDRYTALVLNTTVALSGRTLTITLHPKKGNHAILTAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 498 Download |
| MLRFTLLWLL VFLFASISSS SARPAPYAMR ISCGARQNIR TPPTYTRWYK DFAYTGGIPA 60 NATAPSHITP PLKTLRYFPL SEGPENCYII NRVPKGHYSV RIFFGLVEHE IDNEPLFEVS 120 VEGTIIHSLK SGWSKNDEQV FAEALVFLLD GSVSICFHST GRGDPTIISI EILQIDEKAY 180 YFGPEWGRGV ILKTTSRLTC GTSKPKFDED YSGDHWGGDR FWHPIRTFGK NVDAPRSTES 240 GIKKASTVPN FYPEALYQSA VVSTDSKPDL AYTMDVDPNK NYSIWLHFAE IDATITSAGK 300 RVFDVLINGG TVFENVDVVG MSGDRYTALV LNTTVALSGR TLTITLHPKK GNHAILTAIE 360 VFQVIVAESK TSPEEVRALQ ALKKSLGLPN RFGWNGDPCV PKEHPWSGAD CHFDKSGGKW 420 FIDGLGLGNQ GLRGSLPNEI SKLHHLQSIN LSGNSIHGVI PSSLGTVTSL ETLDLSYNFL 480 NGSIPESLGK LTALRRL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 2.0e-10 | 425 | 497 | 73 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-15 | 200 | 346 | 150 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 1.0e-59 | 31 | 364 | 350 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 22 | 497 | 477 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16758.1 | 0 | 22 | 497 | 22 | 498 | AC010155_11 F3M18.23 [Arabidopsis thaliana] |
| EMBL | CBI30598.1 | 0 | 25 | 497 | 23 | 497 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 22 | 497 | 22 | 498 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002305781.1 | 0 | 29 | 497 | 1 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 497 | 1 | 503 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.0000003 | 413 | 497 | 628 | 709 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 3rgz_A | 0.000005 | 425 | 486 | 661 | 722 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 3rgz_A | 0.00001 | 425 | 497 | 399 | 471 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 3rgz_A | 0.00002 | 425 | 490 | 495 | 560 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 3rgz_A | 0.0001 | 444 | 497 | 394 | 447 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
