y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G094500.1 |
Family | GT20 |
Protein Properties | Length: 897 Molecular Weight: 100870 Isoelectric Point: 6.5624 |
Chromosome | Chromosome/Scaffold: 06 Start: 33184766 End: 33190118 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 90 | 536 | 0 |
ASKQRLLVVANRLPVSAVKHGDSWQLEMSAGGLVSALLGVTEFDSHESLNCIPVFIEEEIAHQYYNGYCNNTLWPLFHYLGLPQEDHLATTRNFKSQFEA YTKANQCFADVVSKHYEEGDAVWCHDYHLMFLPKYLKERNSDMKVGWFLHTPFPSSEIHRMLPSRSELLKSVLSADLVGFHTYDYARHFVSACTRILGLE GTPEGVEDQGKLTRVAVFPVGIDPDRFIQALELPQVKDIVKELKQRFAGYKVLLGVDRLDMIKGIPQKILAFEKFLEENPDWRHKVVLLQIAVPTRTHVL KYKQLTSQVHEIVGRINGRFGSFSSVPIHHLDCTLDFHTLCAIYAITDVALVTSLRDGMNLVSYEFVACQAANKGVLILSEFAGAAQSLGAGAILVNPWN VAEVASSIGYALNMSADEREKRHHHNFLHVTTHTSQGWAETFVSELN |
Full Sequence |
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Protein Sequence Length: 897 Download |
LLQTNRMPGN KYSSSNLPGT PRTRLERLLR ERELKRFSRD FNEGEGELSS AQDSFSPESS 60 TSWLNDEESL QPLSGARTSH DGGARQDFQA SKQRLLVVAN RLPVSAVKHG DSWQLEMSAG 120 GLVSALLGVT EFDSHESLNC IPVFIEEEIA HQYYNGYCNN TLWPLFHYLG LPQEDHLATT 180 RNFKSQFEAY TKANQCFADV VSKHYEEGDA VWCHDYHLMF LPKYLKERNS DMKVGWFLHT 240 PFPSSEIHRM LPSRSELLKS VLSADLVGFH TYDYARHFVS ACTRILGLEG TPEGVEDQGK 300 LTRVAVFPVG IDPDRFIQAL ELPQVKDIVK ELKQRFAGYK VLLGVDRLDM IKGIPQKILA 360 FEKFLEENPD WRHKVVLLQI AVPTRTHVLK YKQLTSQVHE IVGRINGRFG SFSSVPIHHL 420 DCTLDFHTLC AIYAITDVAL VTSLRDGMNL VSYEFVACQA ANKGVLILSE FAGAAQSLGA 480 GAILVNPWNV AEVASSIGYA LNMSADEREK RHHHNFLHVT THTSQGWAET FVSELNETIV 540 EAQLRSRQIP PPLPIEAAVD RYACSNNRLL ILGFDATLTE PLDALWRKGN QIKELKHKIR 600 SDLREPLRKL CDDPKTTVLV LSGSNRNALD NNFGDFNLWL AAENGIFLRA TMGEWMMTMP 660 ENTSMDWVDS VKHVFEYFTQ RTPRSHFELR ETSLIWDYRY SDAEFGRLQA RDLLMHLWTG 720 PISNLSLDVV QGSQSIEVRS VGVTKGAAID RILGEIVHNK GMKEPIDYVL CMGHFLAKDE 780 DIYSYFELML PSETPTSSSS QVPTPFGTPT AGSSAAPLKK QHSLSPGKKS SFIGESMLDP 840 MMGADRMSLL EGSSLINLQA ENYFSCSVAR KRSKSRYLLR SSDEVLELLR GMANHC* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 7 | 894 | 930 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 87 | 895 | 832 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PRK14501 | PRK14501 | 0 | 94 | 773 | 709 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 94 | 537 | 468 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
pfam00982 | Glyco_transf_20 | 0 | 93 | 537 | 474 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA69879.1 | 0 | 7 | 894 | 1 | 937 | trehalose-6-phosphate synthase [Arabidopsis thaliana] |
RefSeq | NP_177979.1 | 0 | 7 | 894 | 1 | 937 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002305707.1 | 0 | 29 | 893 | 1 | 893 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331300.1 | 0 | 7 | 894 | 1 | 919 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522296.1 | 0 | 7 | 894 | 1 | 910 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uqu_B | 0 | 145 | 547 | 68 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqu_A | 0 | 145 | 547 | 68 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqt_B | 0 | 145 | 547 | 68 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqt_A | 0 | 145 | 547 | 68 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 2wtx_D | 0 | 145 | 547 | 68 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES813375 | 356 | 432 | 787 | 0 |
DW069910 | 288 | 157 | 444 | 0 |
CX545499 | 305 | 374 | 678 | 0 |
EL390904 | 268 | 274 | 541 | 0 |
CB629539 | 271 | 249 | 519 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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