Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G094700.5 |
Family | GT20 |
Protein Properties | Length: 918 Molecular Weight: 104088 Isoelectric Point: 5.8656 |
Chromosome | Chromosome/Scaffold: 06 Start: 33234153 End: 33240989 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 88 | 556 | 0 |
SKQRLLVVANRLPVSAVRHGEDSWQLEMSVGGLVTALLGVKEFDTRWIGWAGVNVPDEIGQKALAKALDEKRCIPVFLDEEVVHQYYNGYCNNILWPLFH YIGLPQEDRLATTRSFQSQFDAYKKANQLFADVVNEHYEEGDVVWCHDYHLMFLPKCLKERNSKMKVGWFLHTPFPSSEIHRMLPSRLELLRSVLAADLV GFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRIAAFPVGIDSERFIKALELPEVQDHMKVLKQRFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEE NPNWCNKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEYVACQESKKGVLI LSEFAGAAQSLGAGAILVNPWNVTEVASSIGYALNMPADEREKRHHHNFKHVISHTAQEWAATFVSELN |
Full Sequence |
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Protein Sequence Length: 918 Download |
MPGNLYNNCS NLPATPTRLE RLLRERELRK YSKCLNDCEA ELPSSTQDCF SPDLETSTCW 60 FNDEELLETV SASRSLNDDG ERLDFRTSKQ RLLVVANRLP VSAVRHGEDS WQLEMSVGGL 120 VTALLGVKEF DTRWIGWAGV NVPDEIGQKA LAKALDEKRC IPVFLDEEVV HQYYNGYCNN 180 ILWPLFHYIG LPQEDRLATT RSFQSQFDAY KKANQLFADV VNEHYEEGDV VWCHDYHLMF 240 LPKCLKERNS KMKVGWFLHT PFPSSEIHRM LPSRLELLRS VLAADLVGFH TYDYARHFVS 300 ACTRILGLEG TPEGVEDQGK LTRIAAFPVG IDSERFIKAL ELPEVQDHMK VLKQRFAGRK 360 VMLGVDRLDM IKGIPQKILA FEKFLEENPN WCNKVVLLQI AVPTRTDVPE YQKLTSQVHE 420 IVGRINGRFG SLTAVPIHHL DRSLDFHELC ALYAVTDVAL VTSLRDGMNL VSYEYVACQE 480 SKKGVLILSE FAGAAQSLGA GAILVNPWNV TEVASSIGYA LNMPADEREK RHHHNFKHVI 540 SHTAQEWAAT FVSELNVTIV EAQLRTRQIP PPLPIEVAVD RYSCLNNRLL ILGFNATLTE 600 PVDTLGRKDS QINEWEPKLR PDLREPLRKL CDDPKTTVLV LSGSARNVLD DNFSDYNLWL 660 AAENGMFLRV TTGDWMTTMP ENLSMEWVDS VKNVFEYFTD RTPRSQFEVR ETSLIWNYKY 720 SDVEFGRLQA RDLLQHLWTG PISNASLDVV QGRRSVEVRS VAVTKGAAID RILGEIVHNK 780 GMKEPIDYVL CIGHFLTKDE DIYTFFEPEL PSEVPASVRP QVPTQVRTSI VGSRAALLMK 840 QNSMSAVEQN KSYAIDGDTL HSMVTDRISL QEGSSVLDLQ ANDYFSCSVA RKRSNSRYRL 900 QSSDEVVTLL RELADHR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 1 | 915 | 929 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 84 | 916 | 833 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 91 | 556 | 468 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
pfam00982 | Glyco_transf_20 | 0 | 90 | 556 | 473 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 91 | 803 | 722 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA69879.1 | 0 | 1 | 915 | 1 | 937 | trehalose-6-phosphate synthase [Arabidopsis thaliana] |
RefSeq | NP_177979.1 | 0 | 1 | 915 | 1 | 937 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002305707.1 | 0 | 23 | 917 | 1 | 896 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522296.1 | 0 | 1 | 915 | 1 | 910 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
RefSeq | XP_002531237.1 | 0 | 1 | 914 | 1 | 920 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uqu_B | 0 | 91 | 567 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqu_A | 0 | 91 | 567 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqt_B | 0 | 91 | 567 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqt_A | 0 | 91 | 567 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1gz5_D | 0 | 91 | 559 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX546763 | 305 | 77 | 380 | 0 |
ES813375 | 361 | 452 | 812 | 0 |
CV711307 | 294 | 88 | 381 | 0 |
DW069910 | 288 | 177 | 464 | 0 |
CB651133 | 280 | 118 | 397 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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