Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G094700.6 |
Family | GT20 |
Protein Properties | Length: 913 Molecular Weight: 103407 Isoelectric Point: 5.7992 |
Chromosome | Chromosome/Scaffold: 06 Start: 33234153 End: 33240989 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 88 | 551 | 0 |
SKQRLLVVANRLPVSAVRHGEDSWQLEMSVGGLVTALLGVKEFDTRWIGWAGVNVPDEIGQKALAKALDEKLMQRCIPVFLDEEVVHQYYNGYCNNILWP LFHYIGLPQEDRLATTRSFQSQFDAYKKANQLFADVVNEHYEEGDVVWCHDYHLMFLPKCLKERNSKMKVGWFLHTPFPSSEIHRMLPSRLELLRSVLAA DLVGHFVSACTRILGLEGTPEGVEDQGKLTRIAAFPVGIDSERFIKALELPEVQDHMKVLKQRFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPNWC NKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEYVACQESKKGVLILSEFA GAAQSLGAGAILVNPWNVTEVASSIGYALNMPADEREKRHHHNFKHVISHTAQEWAATFVSELN |
Full Sequence |
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Protein Sequence Length: 913 Download |
MPGNLYNNCS NLPATPTRLE RLLRERELRK YSKCLNDCEA ELPSSTQDCF SPDLETSTCW 60 FNDEELLETV SASRSLNDDG ERLDFRTSKQ RLLVVANRLP VSAVRHGEDS WQLEMSVGGL 120 VTALLGVKEF DTRWIGWAGV NVPDEIGQKA LAKALDEKLM QRCIPVFLDE EVVHQYYNGY 180 CNNILWPLFH YIGLPQEDRL ATTRSFQSQF DAYKKANQLF ADVVNEHYEE GDVVWCHDYH 240 LMFLPKCLKE RNSKMKVGWF LHTPFPSSEI HRMLPSRLEL LRSVLAADLV GHFVSACTRI 300 LGLEGTPEGV EDQGKLTRIA AFPVGIDSER FIKALELPEV QDHMKVLKQR FAGRKVMLGV 360 DRLDMIKGIP QKILAFEKFL EENPNWCNKV VLLQIAVPTR TDVPEYQKLT SQVHEIVGRI 420 NGRFGSLTAV PIHHLDRSLD FHELCALYAV TDVALVTSLR DGMNLVSYEY VACQESKKGV 480 LILSEFAGAA QSLGAGAILV NPWNVTEVAS SIGYALNMPA DEREKRHHHN FKHVISHTAQ 540 EWAATFVSEL NVTIVEAQLR TRQIPPPLPI EVAVDRYSCL NNRLLILGFN ATLTEPVDTL 600 GRKDSQINEW EPKLRPDLRE PLRKLCDDPK TTVLVLSGSA RNVLDDNFSD YNLWLAAENG 660 MFLRVTTGDW MTTMPENLSM EWVDSVKNVF EYFTDRTPRS QFEVRETSLI WNYKYSDVEF 720 GRLQARDLLQ HLWTGPISNA SLDVVQGRRS VEVRSVAVTK GAAIDRILGE IVHNKGMKEP 780 IDYVLCIGHF LTKDEDIYTF FEPELPSEVP ASVRPQVPTQ VRTSIVGSRA ALLMKQNSMS 840 AVEQNKSYAI DGDTLHSMVT DRISLQEGSS VLDLQANDYF SCSVARKRSN SRYRLQSSDE 900 VVTLLRELAD HR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 1 | 910 | 932 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 84 | 911 | 836 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 91 | 551 | 470 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
pfam00982 | Glyco_transf_20 | 0 | 90 | 551 | 475 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 91 | 798 | 722 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA69879.1 | 0 | 1 | 910 | 1 | 937 | trehalose-6-phosphate synthase [Arabidopsis thaliana] |
RefSeq | NP_177979.1 | 0 | 1 | 910 | 1 | 937 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002305707.1 | 0 | 23 | 912 | 1 | 896 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522296.1 | 0 | 1 | 910 | 1 | 910 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
RefSeq | XP_002531237.1 | 0 | 1 | 909 | 1 | 920 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uqu_B | 0 | 91 | 562 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqu_A | 0 | 91 | 562 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqt_B | 0 | 91 | 562 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqt_A | 0 | 91 | 562 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 2wtx_D | 0 | 91 | 562 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES813375 | 361 | 447 | 807 | 0 |
CX546763 | 308 | 77 | 375 | 0 |
DW069910 | 288 | 180 | 459 | 0 |
CV711307 | 297 | 88 | 376 | 0 |
CX545499 | 305 | 389 | 693 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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