Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G118100.1 |
Family | GH3 |
Protein Properties | Length: 624 Molecular Weight: 67773.2 Isoelectric Point: 9.0161 |
Chromosome | Chromosome/Scaffold: 06 Start: 36780978 End: 36784692 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 106 | 340 | 0 |
STRLGIPMIYGIDAVHGHNNVYKATIFPHNIGLGVTRDPNLVKRIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQMMTEIITGLQG GLPVHSKKGVPFVAGKNKVAACAKHYVGDGGTTKGINENNTVISWNGLLGIHMPAYFNSIAKGVATIMTSYSSWNGKKMHANHDLVTDFLKNKLKFRGFV ISDWQGLDRITSPPHANYSYSVEAGVGAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 624 Download |
MGKFSIPKLG FLLLCCLAAL TEATYVKYKD PKQPLGVRIK DLMRRMTLAE KIGQMTQIER 60 TVATPDAMKN YFIGSVLSGG GSVPAQKATP ETWIEMVNTM QKASLSTRLG IPMIYGIDAV 120 HGHNNVYKAT IFPHNIGLGV TRDPNLVKRI GEATALEVRA TGIPYVFAPC IAVCRDPRWG 180 RCYESYSEDH KIVQMMTEII TGLQGGLPVH SKKGVPFVAG KNKVAACAKH YVGDGGTTKG 240 INENNTVISW NGLLGIHMPA YFNSIAKGVA TIMTSYSSWN GKKMHANHDL VTDFLKNKLK 300 FRGFVISDWQ GLDRITSPPH ANYSYSVEAG VGAGIDMVMV PYNFTEFIDD LTYQVKNNII 360 PMSRIDDAVK RILRVKFVMG LFENPMADNS LVNQLGSQAR EAVRKSLVLL KNGESADKPL 420 LPLPKKATKI LVAGTHADNL GYQCGGWTIT WQGLGGNDLT TGTTILQAVK NTVDSSTQVV 480 YSENPDAGFV KSGEFSYAIV VVGEPPYAET YGDSLNLTIS EPGPKTIYNV CGSVKCVVVV 540 ISGRPVVVQP FVSSVHALVA AWLPGTEGQG VADVLFGDYG FTGKLARTWF KTVDQLPMNV 600 GDSHYDPLFP FGFGLTTKPT HQN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 9.0e-11 | 557 | 616 | 82 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-29 | 407 | 616 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-50 | 39 | 412 | 394 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 6.0e-79 | 46 | 450 | 416 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-91 | 47 | 375 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 1 | 623 | 1 | 628 | beta-D-glucosidase [Gossypium hirsutum] |
RefSeq | XP_002278363.1 | 0 | 1 | 622 | 1 | 627 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002278377.1 | 0 | 1 | 622 | 1 | 628 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002313632.1 | 0 | 1 | 619 | 1 | 624 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 1 | 619 | 1 | 629 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 25 | 622 | 2 | 604 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1iex_A | 0 | 25 | 622 | 2 | 604 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1iew_A | 0 | 25 | 622 | 2 | 604 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1iev_A | 0 | 25 | 622 | 2 | 604 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1ieq_A | 0 | 25 | 622 | 2 | 604 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |