| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G138400.1 |
| Family | GT47 |
| Protein Properties | Length: 794 Molecular Weight: 90319.3 Isoelectric Point: 5.8833 |
| Chromosome | Chromosome/Scaffold: 06 Start: 39488656 End: 39495968 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 346 | 700 | 0 |
| KKRPLIYVYDLPPEFNSLLLEGRHFKFECVNRIYDERNATLWTEQLYGSQMAMYESILASPHRTLNGEEADFFFVPVLDACIITRADDAPHLSLENHTGL RSSLTLEFYEKAYEHIIEKYPYWNRSAGKDHIWSFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDKIPSDRRGNHSCFDPAKDLVLPA WKRPDVTSLSAKLWSRPRENRKTLFYFNGNLGPAYTSGRPEATYSMGIRQKLADEFGSTPNKEGKLGKQYAEDVVVTPLRSENYHEDIANSTFCAVLPGD GWSGRMEDSILQGCIPVVIQDGIFLPYENMLNYESFAVRIREDEIPNLIKILRNI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 794 Download |
| MFSVQKWKCS WSMVATVASI IVLVSVVHLF LFPVVPSLDY FSARQVQYKC VPINSSLEQS 60 TDHVWEKKPQ GLNLDLRFPS DLHNGVVYRN APWKAEIGRW LSGCDAIATE VNIVETLGGR 120 RCKSDCSGQG VCNHELGQCR CFHGFSGEAC SERLNLSCNY PGTPELPYGR WVVSICSAHC 180 DTTRAMCFCG EGTKYPNRPV AEACGFQMNL PSEPEGAKLT DWAKADLDNI FTTNGSKPGW 240 CNVDPAAAYD SKVLFKEECD CKYDGLWGRF CEVPVESVCI NQCSGNGHCR GGFCQCYNGW 300 YGTDCSIPSV VSPIGEWPKW LKPAHLDIPS NEVTGRLVNL NAAVEKKRPL IYVYDLPPEF 360 NSLLLEGRHF KFECVNRIYD ERNATLWTEQ LYGSQMAMYE SILASPHRTL NGEEADFFFV 420 PVLDACIITR ADDAPHLSLE NHTGLRSSLT LEFYEKAYEH IIEKYPYWNR SAGKDHIWSF 480 SWDEGACYAP KEIWNSMMLV HWGNTNSKHN HSTTAYWADN WDKIPSDRRG NHSCFDPAKD 540 LVLPAWKRPD VTSLSAKLWS RPRENRKTLF YFNGNLGPAY TSGRPEATYS MGIRQKLADE 600 FGSTPNKEGK LGKQYAEDVV VTPLRSENYH EDIANSTFCA VLPGDGWSGR MEDSILQGCI 660 PVVIQDGIFL PYENMLNYES FAVRIREDEI PNLIKILRNI NETEIEFKLT NVQKIWQRFL 720 YRDSILLEAE RQQTGFGRVE DWAVEFLQQS DDDVFTTFLQ VLHYKLHNDP WRLELAHLKK 780 DYGLPPECLI RIK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07974 | EGF_2 | 0.002 | 281 | 305 | 27 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
| pfam03016 | Exostosin | 4.0e-64 | 346 | 700 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN80640.1 | 0 | 2 | 783 | 3 | 809 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI29877.1 | 0 | 2 | 793 | 31 | 822 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_191322.3 | 0 | 1 | 789 | 1 | 789 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277596.1 | 0 | 2 | 793 | 3 | 794 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308967.1 | 0 | 1 | 791 | 1 | 791 | predicted protein [Populus trichocarpa] |
