| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G146800.1 |
| Family | AA7 |
| Protein Properties | Length: 576 Molecular Weight: 63549.9 Isoelectric Point: 6.7808 |
| Chromosome | Chromosome/Scaffold: 06 Start: 40501514 End: 40510616 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 151 | 346 | 1.3e-24 |
| NIPDVVVFPRSEEEVSQIVKSCNKHKVPIVPYGGATSIEGHTLSPNGGVCIDMTLMKRVKALHIRDMDVVVEPGIGWMELNEYLEPYGLFSPLIQVRPGA TIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGVVTEVTLRLQKIPEHSVVAMCNFPTIKAAAD | |||
| Full Sequence |
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| Protein Sequence Length: 576 Download |
| MGFSFWLARL RSCSNKSAFS NAFRDSFYHY KSQLNTCQKN LPSTIAEKTN SHAFSWSSCL 60 LPLAFAVSAG SLTFQSHNNH PSLCEPSNLD SRKVTIGGKA STEFVVKGTH KEVPQELIDE 120 LKAICQDNMT LDYDERFYHG KPQNSFHKAV NIPDVVVFPR SEEEVSQIVK SCNKHKVPIV 180 PYGGATSIEG HTLSPNGGVC IDMTLMKRVK ALHIRDMDVV VEPGIGWMEL NEYLEPYGLF 240 SPLIQVRPGA TIGGMCATRC SGSLAVRYGT MRDNVISLKV VLANGDIVKT ASRARKSAAG 300 YDLTRLMIGS EGTLGVVTEV TLRLQKIPEH SVVAMCNFPT IKAAADVAID TMLSGIQVSR 360 VELLDEVQVR AINIANGKNL PEVPTLMFEF IGTKAYSHEQ TQIVQRIVSE HNGSDFVFAE 420 DPEAKKELWK IRKEALWACF AMEPNFEAMI SDVCVPLSNL AELISRSKQE LDASSLVCTV 480 IAHAGDGNFH TVILFDPNEE EHRREAERLN QFMVYTALSM EGTCTGEHGV GTGKMKYLEK 540 ELGIEALQTM KRIKTALDPN NIMNPGKLIP PHVCF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 2.0e-51 | 152 | 574 | 430 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 2.0e-69 | 327 | 568 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 2.0e-95 | 156 | 567 | 423 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 4.0e-125 | 120 | 571 | 465 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 55 | 575 | 521 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001142976.1 | 0 | 87 | 575 | 71 | 555 | hypothetical protein LOC100275430 [Zea mays] |
| RefSeq | NP_568170.1 | 0 | 56 | 575 | 49 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 1 | 575 | 1 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 96 | 575 | 1 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 1 | 575 | 1 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 2e-38 | 155 | 569 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 2e-38 | 155 | 569 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 2e-38 | 155 | 569 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 2e-38 | 155 | 569 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 2e-38 | 155 | 569 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX265038 | 324 | 167 | 489 | 0 |
| DY305587 | 374 | 207 | 575 | 0 |
| EX261606 | 323 | 224 | 542 | 0 |
| EL444323 | 286 | 97 | 382 | 0 |
| EX261606 | 50 | 523 | 572 | 0.15 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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