Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G159600.1 |
Family | GT47 |
Protein Properties | Length: 580 Molecular Weight: 65159.3 Isoelectric Point: 9.0213 |
Chromosome | Chromosome/Scaffold: 06 Start: 41872371 End: 41876668 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 242 | 523 | 0 |
EKQFKVFVYKEGEPPVFHDGPCKSIYSMEGNFIYKLDVDTKFQTKDPQKAHVFYLPFSVAKMVRFVYSRDSRDFSPIRRTVVDYINLVAQKYPYWNRSHG TDHFMLACHDWGPEASFSLPYLEKNSIRALCNANTSERFNPVKDVSIPEINLITDKLTGLMGGPSASRRQILAFFAGGVHGPIRPVLLEHWEDKDEDIKV HKYLPRGVNYYDMMRNSKYCICPSGYEVASPRIVEALYNGCVPVLISKSYVAPFSDVLRWKSFSVTVSVDDIPKLKEILMNI |
Full Sequence |
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Protein Sequence Length: 580 Download |
MGRDGNKSCF ACCFSTPTTS SSSSSSSSAI KLLFFIVPLI LVSFIVFVLV PRNSTWALIY 60 SLPPSTSAVA AAANSSEKLG AAVYAESSQQ VLDLPSRVVK TVDVGGSSGE ATLSDSDEVA 120 VNRSASPQLS AVEAVTKFQE LNETKEYSSL NTSITDSDNL NITINGTPNN ATTSSNETIA 180 LPLKHNRQVR TKLDKVEAGL QRARSAIREA KNGSQLRDPD YVPVGPMYWD AKAFHRSYLE 240 MEKQFKVFVY KEGEPPVFHD GPCKSIYSME GNFIYKLDVD TKFQTKDPQK AHVFYLPFSV 300 AKMVRFVYSR DSRDFSPIRR TVVDYINLVA QKYPYWNRSH GTDHFMLACH DWGPEASFSL 360 PYLEKNSIRA LCNANTSERF NPVKDVSIPE INLITDKLTG LMGGPSASRR QILAFFAGGV 420 HGPIRPVLLE HWEDKDEDIK VHKYLPRGVN YYDMMRNSKY CICPSGYEVA SPRIVEALYN 480 GCVPVLISKS YVAPFSDVLR WKSFSVTVSV DDIPKLKEIL MNISTRQYIR MQRRVLQVRR 540 HFEFNSPPKR YDVFHMILHS VWLRRLNVRI TDDHGVVAN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-65 | 241 | 523 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08605.1 | 0 | 162 | 572 | 2 | 407 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001031828.1 | 0 | 148 | 572 | 90 | 517 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002284018.1 | 0 | 241 | 576 | 1 | 335 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326234.1 | 0 | 241 | 568 | 1 | 328 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528630.1 | 0 | 214 | 574 | 209 | 569 | catalytic, putative [Ricinus communis] |