Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.006G171500.1 |
Family | AA1 |
Protein Properties | Length: 584 Molecular Weight: 64609.9 Isoelectric Point: 10.4584 |
Chromosome | Chromosome/Scaffold: 06 Start: 43067237 End: 43069940 |
Description | laccase 17 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 37 | 572 | 0 |
TRHYKFDIKMQSVTRLCQTKNIVTVNGQFPGPRIIAREGDRLLIKVVNHVKYNVTIHWHGIRQIRSGWADGPAYVTQCPIQTGQSYVYNFTLTGQRGTLF WHAHISWLRATLYGPIVILPKKHASYPFPHPYKEVPIVFGEWWKADTETIINQAMATGGAPNISDAFTINGLPGPSYNCSAKDTFKLKVKAGKTYLLRLV NAALNDELFFRVANHTLTVVEADAVYVKPFKTDIVLITPGQTTNVLLRAKSKTPSAKFAMSARPYATGPATFDNTTTIGILEYEKSASASKSNHKNLPLL KAKLPQFNDSSYAMKFQRKFRSLATAKFPAKVPKNVDRRFFFTVGLGILPCSKNQTCQGPNNTRPAAAVNNVSFVQPNIALLQAHFFNKSKGVYTTNFPT NPPFKFNYTGTPPKNIMLSSGTKLVALPFNISVELVMQDTSILGAESHPLHLHGFNFFVLGQGVGNFDPKKDPAKFNLVDPAERNTVGVPAGGWVAIRFL ADNPGVWFMHCHLEVHTSWGLKMAWVVNDGKGRKQK |
Full Sequence |
---|
Protein Sequence Length: 584 Download |
MVSLVLTSSD IFRALFLALS VVWLVSDLAF AKHAGITRHY KFDIKMQSVT RLCQTKNIVT 60 VNGQFPGPRI IAREGDRLLI KVVNHVKYNV TIHWHGIRQI RSGWADGPAY VTQCPIQTGQ 120 SYVYNFTLTG QRGTLFWHAH ISWLRATLYG PIVILPKKHA SYPFPHPYKE VPIVFGEWWK 180 ADTETIINQA MATGGAPNIS DAFTINGLPG PSYNCSAKDT FKLKVKAGKT YLLRLVNAAL 240 NDELFFRVAN HTLTVVEADA VYVKPFKTDI VLITPGQTTN VLLRAKSKTP SAKFAMSARP 300 YATGPATFDN TTTIGILEYE KSASASKSNH KNLPLLKAKL PQFNDSSYAM KFQRKFRSLA 360 TAKFPAKVPK NVDRRFFFTV GLGILPCSKN QTCQGPNNTR PAAAVNNVSF VQPNIALLQA 420 HFFNKSKGVY TTNFPTNPPF KFNYTGTPPK NIMLSSGTKL VALPFNISVE LVMQDTSILG 480 AESHPLHLHG FNFFVLGQGV GNFDPKKDPA KFNLVDPAER NTVGVPAGGW VAIRFLADNP 540 GVWFMHCHLE VHTSWGLKMA WVVNDGKGRK QKLPPPPADL PKC* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-53 | 43 | 158 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-76 | 17 | 574 | 589 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-83 | 16 | 574 | 594 | + oxidoreductase | ||
TIGR03388 | ascorbase | 4.0e-97 | 37 | 575 | 575 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 35 | 583 | 550 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30528.1 | 0 | 9 | 583 | 1255 | 1829 | unnamed protein product [Vitis vinifera] |
EMBL | CBI30528.1 | 0 | 22 | 175 | 1 | 154 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002269038.1 | 0 | 9 | 583 | 3 | 577 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309069.1 | 0 | 9 | 583 | 3 | 579 | laccase 110c [Populus trichocarpa] |
RefSeq | XP_002531562.1 | 0 | 6 | 583 | 7 | 585 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 38 | 574 | 4 | 532 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1asq_A | 0 | 38 | 574 | 4 | 532 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1asp_B | 0 | 38 | 574 | 4 | 532 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1asp_A | 0 | 38 | 574 | 4 | 532 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1aso_B | 0 | 38 | 574 | 4 | 532 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO797675 | 508 | 81 | 584 | 0 |
DW241723 | 285 | 280 | 564 | 0 |
DW239164 | 293 | 288 | 580 | 0 |
DW238664 | 286 | 264 | 549 | 0 |
DW238986 | 280 | 278 | 557 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|