Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G201600.1 |
Family | GT5 |
Protein Properties | Length: 657 Molecular Weight: 72781.9 Isoelectric Point: 4.8674 |
Chromosome | Chromosome/Scaffold: 06 Start: 45832362 End: 45837731 |
Description | Glycogen/starch synthases, ADP-glucose type |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 147 | 646 | 0 |
NIVFVTAEAAPYSKTGGLGDVCGSLPGVLAGCGHRVMVVSPRYLNGTSADKNFAGAYDVDRHIKVPCFGGEQEVAFFHEYKKGVDWVFVDHPSFHRPGNL YGDSHGAFGDNQFRFTLLCHAACEAPLVLPLGGYTYGEKCLFLVNDWHAGLVPVLLASKYRPFGIYKDARSILVIHNLAHQGVEPAASFKNLGLPWEWYG ALEWVFPTWARTHALDTGEAVNILKGAIVTADRILTVSKGYAWEITTVEGGHGLNELLSSRRIVLNGIVNGIDVTEWDSSSDEHISFHYSADDLSGKARC KTALQQELGLPIRPECPLIGFIGRLDYQKGIDLIRWAIPELMEENVQFVMLGSGDPLYEDWMRAAEKTYRDKFRGWVGFNVPISHRITAGCDILLMPSRF EPCGLNQLFAMRYGTVPVVHATGGLRDTVENFNPYAGDRSGEGTGWTFSPLTKESMLEALRTAIMTYRDHKSTWEALMRRGMQRDFTWETAAIHYEQVFE |
Full Sequence |
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Protein Sequence Length: 657 Download |
MESLQVTRLM SCKLSANISH KACSFRPSRQ LGFSSLSRRS FQNGKLTVAR SDITANGGGF 60 GGLDDSSNSN SIEEEDDDEE EEEENGLMLG LDRDDCGSVI ALHLIPPSGE VTIDSHQDEA 120 ADTKGEDEGI EEEKGGEEEI RSRVTYNIVF VTAEAAPYSK TGGLGDVCGS LPGVLAGCGH 180 RVMVVSPRYL NGTSADKNFA GAYDVDRHIK VPCFGGEQEV AFFHEYKKGV DWVFVDHPSF 240 HRPGNLYGDS HGAFGDNQFR FTLLCHAACE APLVLPLGGY TYGEKCLFLV NDWHAGLVPV 300 LLASKYRPFG IYKDARSILV IHNLAHQGVE PAASFKNLGL PWEWYGALEW VFPTWARTHA 360 LDTGEAVNIL KGAIVTADRI LTVSKGYAWE ITTVEGGHGL NELLSSRRIV LNGIVNGIDV 420 TEWDSSSDEH ISFHYSADDL SGKARCKTAL QQELGLPIRP ECPLIGFIGR LDYQKGIDLI 480 RWAIPELMEE NVQFVMLGSG DPLYEDWMRA AEKTYRDKFR GWVGFNVPIS HRITAGCDIL 540 LMPSRFEPCG LNQLFAMRYG TVPVVHATGG LRDTVENFNP YAGDRSGEGT GWTFSPLTKE 600 SMLEALRTAI MTYRDHKSTW EALMRRGMQR DFTWETAAIH YEQVFEWAYI DPPYIT* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-105 | 151 | 645 | 505 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 6.0e-147 | 147 | 654 | 517 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 147 | 647 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 0 | 147 | 646 | 501 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PRK00654 | glgA | 0 | 147 | 646 | 507 | + glycogen synthase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV25893.1 | 0 | 1 | 656 | 1 | 633 | starch synthase isoform I [Manihot esculenta] |
DDBJ | BAD18845.1 | 0 | 1 | 654 | 1 | 644 | starch synthase I precursor [Phaseolus vulgaris] |
EMBL | CBI23015.1 | 0 | 87 | 656 | 1 | 568 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277372.1 | 0 | 1 | 656 | 1 | 633 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321996.1 | 0 | 1 | 656 | 1 | 649 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 147 | 645 | 11 | 508 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
PDB | 3vue_A | 0 | 147 | 645 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 147 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 147 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 147 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO595058 | 492 | 163 | 654 | 0 |
HO581986 | 367 | 256 | 621 | 0 |
GO872237 | 347 | 307 | 653 | 0 |
GO842198 | 336 | 170 | 505 | 0 |
HO581986 | 34 | 621 | 654 | 0.0009 |
Sequence Alignments (This image is cropped. Click for full image.) |
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