| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G205000.2 |
| Family | GT5 |
| Protein Properties | Length: 607 Molecular Weight: 66651.9 Isoelectric Point: 8.1467 |
| Chromosome | Chromosome/Scaffold: 06 Start: 46071431 End: 46075250 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 81 | 577 | 0 |
| NIIFVGAEVGPWSKTGGLGDVLGGLPPAMAAKGHRVMTVSPRYDQYKDAWDTCVTVDLKVGEETLTVRFFHCYKRGVDRIFVDHPVFLEKVWGKTGSKIY GPRAGLDYKDNQLRFSLLCLAALEAPRVLNLNSSKYFSGPYGENVVFVANDWHTALLPCYLKSMYQSRGIYMSAKVAFCIHNIAYQGRFAFEDYSLLNLP DQFKSSFDFMDGYDKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDHIIRKTGITGIVNGMDVQEWNPTTDKYISVKYDATTVTCAKRL LKVALQAELGLPCDENVPLIGFIGRLEEQKGSDILTAAIPKFIGQNCQIVVLGTGKTAMEKQIQQLETLYPGKAIGVAKFNVPLAHMIFAGADYLLVPSR FEPCGLIQLQAMRYGTIPIVASTGGLVDTVKEGFTGFQMGAFNVECDTVDPRDVDKVAKGVIRALATYGTGAMREMIQNCMAQDLSWKGPSTLWEKI | |||
| Full Sequence |
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| Protein Sequence Length: 607 Download |
| MATVTASHFV SRISHGAETK ANLSQTGLRN QSMTHNGLRF LNKVDRLQMR TNAKAVARNA 60 VKDEHPNDKL SGKIICGTGM NIIFVGAEVG PWSKTGGLGD VLGGLPPAMA AKGHRVMTVS 120 PRYDQYKDAW DTCVTVDLKV GEETLTVRFF HCYKRGVDRI FVDHPVFLEK VWGKTGSKIY 180 GPRAGLDYKD NQLRFSLLCL AALEAPRVLN LNSSKYFSGP YGENVVFVAN DWHTALLPCY 240 LKSMYQSRGI YMSAKVAFCI HNIAYQGRFA FEDYSLLNLP DQFKSSFDFM DGYDKPVKGR 300 KINWMKAGIL ESHRVLTVSP YYAQELVSGE DKGVELDHII RKTGITGIVN GMDVQEWNPT 360 TDKYISVKYD ATTVTCAKRL LKVALQAELG LPCDENVPLI GFIGRLEEQK GSDILTAAIP 420 KFIGQNCQIV VLGTGKTAME KQIQQLETLY PGKAIGVAKF NVPLAHMIFA GADYLLVPSR 480 FEPCGLIQLQ AMRYGTIPIV ASTGGLVDTV KEGFTGFQMG AFNVECDTVD PRDVDKVAKG 540 VIRALATYGT GAMREMIQNC MAQDLSWKGP STLWEKILLS LEVAGSEPGI EGEEIAPLAK 600 ENIATP* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PRK14099 | PRK14099 | 7.0e-84 | 78 | 581 | 524 | + glycogen synthase; Provisional |
| COG0297 | GlgA | 1.0e-107 | 80 | 567 | 507 | + Glycogen synthase [Carbohydrate transport and metabolism] |
| PRK00654 | glgA | 1.0e-130 | 80 | 567 | 506 | + glycogen synthase; Provisional |
| TIGR02095 | glgA | 4.0e-171 | 80 | 581 | 508 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-172 | 81 | 568 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACH72975.1 | 0 | 1 | 606 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACJ11735.1 | 0 | 1 | 606 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACJ11751.1 | 0 | 1 | 606 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACM78591.1 | 0 | 1 | 606 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACV72639.1 | 0 | 1 | 606 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 80 | 606 | 10 | 536 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3vue_A | 0 | 80 | 606 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 80 | 582 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 80 | 583 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 80 | 583 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 611 | 1 | 607 | 0 |
| HO825853 | 518 | 88 | 605 | 0 |
| HO629148 | 590 | 21 | 607 | 0 |
| CN831271 | 382 | 226 | 607 | 0 |
| CO089764 | 284 | 291 | 574 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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