| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G221200.1 |
| Family | GH116 |
| Protein Properties | Length: 970 Molecular Weight: 108779 Isoelectric Point: 7.0013 |
| Chromosome | Chromosome/Scaffold: 06 Start: 47396782 End: 47406361 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 551 | 913 | 0 |
| GRFLYLEGVEYIMWNTYDVHFYASFALLDLFPKIELNIQRDFAKAVLSEDGRRVKFLAEGNYGIRKVRGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMQFGVDVWPAVRTAMEYMEQFDRDDDGLIENDGFPDQTYDAWTVHGVSAYCGCLWLAALQAAAAMAEQIGDRFFAETCKTKFCTA KSAFEKKLWNGSYFKYDSGSSSNSKSIQADQLAGQWYTASSGLAPLFDEFKIRSALQKIYDFNVMKVKGGRMGAVNGMHLNGKVDETCMQSREIWTGVTY AVAANMILAGMEKEAFATAEGIFIAGWSEEGFGYWFQTPEAWTMDGHFRSLIYMRPLAIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 970 Download |
| MVTGNIFHCR KNSWPPEEYV SRHTLHLFDF DSAGPPKHAW RRRLNSHANI LKEFSITFME 60 AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TRESCKPSAS QGVPLGGMGS GSISRGFRGE 120 FRQWQIVPGT CDSSPVMANQ FSIFVSRDSG NKKYASVLAP GRHEGLGKAR DEGISSWGWN 180 LSGQHSTYHA LFPRAWTIYD GEPDPELKVS CRQISPFIPH NYKDTSLPTA VFVYTLVNTG 240 RERAKVSLLF TWANSIGGVS HLSGDHVNEP FIGEDGVSGV LLHHKTAKGN PPVTFAIAAC 300 ETQNVNVTVL PCFGLTEGRS VTARQMWDKM MQDGQFDRQN FNSGPSMPSS PGETLCAAVS 360 ASAWVEPHGK CTIAFSLAWS SPKIKFLKGS SYHRRYTKFY GTSERAALNL AHDALTNYKR 420 WEEEIEKWQS PILNDQRLPE WYKFTLFNEL YFLVAGGTVW IDSSLPSTNV KNDQDSPEDA 480 QRVDVKVTEA EVNRRHTTIS EYSTTSGCNG STGDVLKNNS DPAVTQNKRN SNNLSEHFKW 540 QDQLDDYDDV GRFLYLEGVE YIMWNTYDVH FYASFALLDL FPKIELNIQR DFAKAVLSED 600 GRRVKFLAEG NYGIRKVRGA VPHDLGTHDP WNEMNAYNIH DTSKWKDLNP KFVLQVYRDF 660 AATGDMQFGV DVWPAVRTAM EYMEQFDRDD DGLIENDGFP DQTYDAWTVH GVSAYCGCLW 720 LAALQAAAAM AEQIGDRFFA ETCKTKFCTA KSAFEKKLWN GSYFKYDSGS SSNSKSIQAD 780 QLAGQWYTAS SGLAPLFDEF KIRSALQKIY DFNVMKVKGG RMGAVNGMHL NGKVDETCMQ 840 SREIWTGVTY AVAANMILAG MEKEAFATAE GIFIAGWSEE GFGYWFQTPE AWTMDGHFRS 900 LIYMRPLAIW GMQWALSIPK AILDAPKVNM MDKILISPAT FSLSLTETGV RKIANKAKCF 960 GNSVLHCAC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.003 | 618 | 708 | 100 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 2.0e-30 | 102 | 462 | 365 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 6.0e-64 | 548 | 916 | 387 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 2.0e-67 | 102 | 421 | 333 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| pfam04685 | DUF608 | 1.0e-148 | 551 | 914 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 969 | 1 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 1 | 969 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 969 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 969 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 969 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 693 | 970 | 0 |
| HO779860 | 150 | 545 | 694 | 0 |
| HO779860 | 98 | 416 | 513 | 0 |
| GT045437 | 317 | 117 | 433 | 0 |
| GT045437 | 29 | 429 | 457 | 0.0001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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