| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G221200.2 |
| Family | GH116 |
| Protein Properties | Length: 917 Molecular Weight: 102605 Isoelectric Point: 6.6044 |
| Chromosome | Chromosome/Scaffold: 06 Start: 47396986 End: 47406251 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 498 | 860 | 0 |
| GRFLYLEGVEYIMWNTYDVHFYASFALLDLFPKIELNIQRDFAKAVLSEDGRRVKFLAEGNYGIRKVRGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMQFGVDVWPAVRTAMEYMEQFDRDDDGLIENDGFPDQTYDAWTVHGVSAYCGCLWLAALQAAAAMAEQIGDRFFAETCKTKFCTA KSAFEKKLWNGSYFKYDSGSSSNSKSIQADQLAGQWYTASSGLAPLFDEFKIRSALQKIYDFNVMKVKGGRMGAVNGMHLNGKVDETCMQSREIWTGVTY AVAANMILAGMEKEAFATAEGIFIAGWSEEGFGYWFQTPEAWTMDGHFRSLIYMRPLAIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 917 Download |
| MAGKHLLTLS PVKVASHLHL KEFHWEEWGI YVVQLNGLVC TAGRFYASDC GNLCCRSGSI 60 SRGFRGEFRQ WQIVPGTCDS SPVMANQFSI FVSRDSGNKK YASVLAPGRH EGLGKARDEG 120 ISSWGWNLSG QHSTYHALFP RAWTIYDGEP DPELKVSCRQ ISPFIPHNYK DTSLPTAVFV 180 YTLVNTGRER AKVSLLFTWA NSIGGVSHLS GDHVNEPFIG EDGVSGVLLH HKTAKGNPPV 240 TFAIAACETQ NVNVTVLPCF GLTEGRSVTA RQMWDKMMQD GQFDRQNFNS GPSMPSSPGE 300 TLCAAVSASA WVEPHGKCTI AFSLAWSSPK IKFLKGSSYH RRYTKFYGTS ERAALNLAHD 360 ALTNYKRWEE EIEKWQSPIL NDQRLPEWYK FTLFNELYFL VAGGTVWIDS SLPSTNVKND 420 QDSPEDAQRV DVKVTEAEVN RRHTTISEYS TTSGCNGSTG DVLKNNSDPA VTQNKRNSNN 480 LSEHFKWQDQ LDDYDDVGRF LYLEGVEYIM WNTYDVHFYA SFALLDLFPK IELNIQRDFA 540 KAVLSEDGRR VKFLAEGNYG IRKVRGAVPH DLGTHDPWNE MNAYNIHDTS KWKDLNPKFV 600 LQVYRDFAAT GDMQFGVDVW PAVRTAMEYM EQFDRDDDGL IENDGFPDQT YDAWTVHGVS 660 AYCGCLWLAA LQAAAAMAEQ IGDRFFAETC KTKFCTAKSA FEKKLWNGSY FKYDSGSSSN 720 SKSIQADQLA GQWYTASSGL APLFDEFKIR SALQKIYDFN VMKVKGGRMG AVNGMHLNGK 780 VDETCMQSRE IWTGVTYAVA ANMILAGMEK EAFATAEGIF IAGWSEEGFG YWFQTPEAWT 840 MDGHFRSLIY MRPLAIWGMQ WALSIPKAIL DAPKVNMMDK ILISPATFSL SLTETGVRKI 900 ANKAKCFGNS VLHCAC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.002 | 565 | 655 | 100 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 1.0e-25 | 60 | 409 | 352 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 2.0e-61 | 57 | 368 | 325 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-64 | 495 | 863 | 387 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-148 | 498 | 861 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 57 | 916 | 110 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 57 | 916 | 110 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 57 | 916 | 110 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 57 | 916 | 110 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 57 | 916 | 110 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 640 | 917 | 0 |
| HO779860 | 150 | 492 | 641 | 0 |
| HO779860 | 98 | 363 | 460 | 0 |
| GT045437 | 317 | 64 | 380 | 0 |
| GT045437 | 29 | 376 | 404 | 0.0001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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