Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G226500.1 |
Family | GT47 |
Protein Properties | Length: 531 Molecular Weight: 61183.2 Isoelectric Point: 9.466 |
Chromosome | Chromosome/Scaffold: 06 Start: 47788143 End: 47789912 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 102 | 442 | 0 |
CSGKYIYVHRLPTRFNNGVLRDCRNLIKWFNMCPSLMNSGFGPKVVKPQGVLSRKNWFETNQFMLELIFHQRIKQYKCLTNDSSMASAVYVPFYAGLDVG RYLWGYNTSVRDSAAYGVADWLRKQHEWNRMFGQDHFFVAGRIAWDFRRQTNNESEWGSKLMNLPEFMNITMLSIESSSWSNEFAIPYPTYFHPLRNINV VHWQKRTRTRKRRYLFCFAGAPRPTMEGSIRGEIINQCLSAPNRTCKFLDCKAEGNKCDAPVEVIKVFRDCNFCLQPPGDSYTRRSTFDSIISGCIPVFF HPYSAYAQYIWYFPKNYTKYSVYIPQNDIKNGNVSINRVLS |
Full Sequence |
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Protein Sequence Length: 531 Download |
MEKPIVNGSH CHNQLWFIIR ASFVFCLVLL CLDYSVLSGV KNGVFPLVSQ SFSGSQKTHN 60 ATQFAAIDEI SVPNPISSDA HRDFPFRENN YNITLANVTD PCSGKYIYVH RLPTRFNNGV 120 LRDCRNLIKW FNMCPSLMNS GFGPKVVKPQ GVLSRKNWFE TNQFMLELIF HQRIKQYKCL 180 TNDSSMASAV YVPFYAGLDV GRYLWGYNTS VRDSAAYGVA DWLRKQHEWN RMFGQDHFFV 240 AGRIAWDFRR QTNNESEWGS KLMNLPEFMN ITMLSIESSS WSNEFAIPYP TYFHPLRNIN 300 VVHWQKRTRT RKRRYLFCFA GAPRPTMEGS IRGEIINQCL SAPNRTCKFL DCKAEGNKCD 360 APVEVIKVFR DCNFCLQPPG DSYTRRSTFD SIISGCIPVF FHPYSAYAQY IWYFPKNYTK 420 YSVYIPQNDI KNGNVSINRV LSRFSEHRIS EMRKEVVKLI PKVIYANPKS RFERFEDAID 480 IALKKVTERV NKVGEVMKEG KDPSVDFAAG NQWKLKLAGI VGDQALETLF * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-59 | 101 | 432 | 347 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002300146.1 | 0 | 1 | 523 | 7 | 518 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321098.1 | 0 | 90 | 520 | 34 | 468 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518606.1 | 0 | 99 | 530 | 73 | 498 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002518609.1 | 0 | 1 | 518 | 1 | 490 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 1 | 523 | 1 | 527 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |