Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G245800.2 |
Family | GH47 |
Protein Properties | Length: 616 Molecular Weight: 68930.6 Isoelectric Point: 4.8039 |
Chromosome | Chromosome/Scaffold: 06 Start: 49077870 End: 49085089 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 42 | 467 | 0 |
MFYHAFDGYMEHAFPLDELRPLTCEGEDTLGGYALTLIDSLDTLALLGDRERFTASVEWIGKNLRFDINKTVSIFETTIRVLGGLLSAHLIASDYATGMR IPSYDNELLDLAEDLARRLLPAFDTPTGIPFGSVNLKYGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKNAVRGLWARRSKLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLFIFQEAYSAAMHYLYNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAIRTHTAFFSV WKRYGFTPEGFNLATLSVQHGQKSYPLRPELIESTYWLYKATRNPRYLDAGRDIVASLQYGARCPCGYCHISDVEFHKREDHMESFFLAETVKYLWLLFD LAVGPDNLVENGPYKYIFSTEGHLLP |
Full Sequence |
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Protein Sequence Length: 616 Download |
MKDLNLVPTF LWCLLLFPLH KAVANGVTPE ETKQLRDEVR EMFYHAFDGY MEHAFPLDEL 60 RPLTCEGEDT LGGYALTLID SLDTLALLGD RERFTASVEW IGKNLRFDIN KTVSIFETTI 120 RVLGGLLSAH LIASDYATGM RIPSYDNELL DLAEDLARRL LPAFDTPTGI PFGSVNLKYG 180 VDEHESKITS TAGGGTLTLE FGVLSRLTND PIFEQVTKNA VRGLWARRSK LNLVGAHINV 240 FTGEWTQKDA GIGTSIDSFY EYLLKAYLLF GDEEYLFIFQ EAYSAAMHYL YNDPWYVEVN 300 MDSAAIVWPL FNSLQAFWPG LQVLAGDIDP AIRTHTAFFS VWKRYGFTPE GFNLATLSVQ 360 HGQKSYPLRP ELIESTYWLY KATRNPRYLD AGRDIVASLQ YGARCPCGYC HISDVEFHKR 420 EDHMESFFLA ETVKYLWLLF DLAVGPDNLV ENGPYKYIFS TEGHLLPATP QISLLQEHCS 480 YFGAYCNRDS LKEEPNASDK SADSQETNGS RVSEGWVRTR FPLDSSSFKA SPVSGLIKGL 540 CPGLTHAQKY GISYLASVDT PHEDNSAKKK NIVVKSQAIV VVSDQISNQS LSGDGNDNNV 600 KESTEREPES DPSQS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 1.0e-73 | 36 | 471 | 477 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 5.0e-162 | 42 | 467 | 461 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26354.1 | 0 | 26 | 570 | 29 | 606 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199184.1 | 0 | 17 | 615 | 21 | 621 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280131.1 | 0 | 26 | 614 | 29 | 643 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311656.1 | 0 | 24 | 588 | 1 | 565 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517026.1 | 0 | 19 | 603 | 24 | 608 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4ayr_A | 0 | 23 | 440 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 23 | 440 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 23 | 440 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 23 | 440 | 1 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1nxc_A | 0 | 33 | 467 | 18 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |