| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G252500.1 |
| Family | AA3 |
| Protein Properties | Length: 749 Molecular Weight: 81663 Isoelectric Point: 7.7291 |
| Chromosome | Chromosome/Scaffold: 06 Start: 49570217 End: 49575224 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 214 | 744 | 0 |
| SIDLHKLLTEKGLQVTQDPHKNAIKIKCDAVIVGSGCGGGVAAATLASSGLKVVVLEKGCYFGPADYSPFEGPSMEKLYELGGSLPSIDGQFAILAGSTV GGGSAVNWSACIKTPESVLKEWTDECKIPVFGSNEYVSAMDIVCERIGVTEDCEEEGFQNQVLCKGCKNLGFDIEKVPRNSSSRHYCGSCGFGCRRGDKK GTDKTWLVDAVNNGTVILTACKAEKFMLEQNTTMISTRKMKCTGVIATTLNKNITKKLQIEAKVTISACGALHTPLLMYSSGLKNPNIGRNLRLHPVLMS WGYFPDSDSDIEGKAVDGGIITSVHKVLGPNNNVQAIIETPSLGPGQYTALCPWVSGLDFKQRMLKFSRTAHLITIVKDRGSGEVHMGGRVTYKFDATDR ENLRAGLRRSLRVLVAAGAVEVGTHRSDGQKLKCKGVSKEELEEFLDTVFSVGGPLFWGDKWMVHTTAHQMGSCKMGRNEKDGGVDENGESWEAEGLYVC DASVLPTAIGVNPMITVMSTAYCLSKRIAAK | |||
| Full Sequence |
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| Protein Sequence Length: 749 Download |
| MGGKLGKGFM KGGKIEEIEG KKYDHGFSSA EVNTLAAIAE ALFPSLPPSS CCFERRENQT 60 ISKAVRSFME TSASQSPTPD EAAEMLWKRL FIECVVVVRV VLLLLSTKVG TLLLCGSHCW 120 GKEWPYINGF TSMPLAKREQ VLQAWFKHRF FTPFRVAFLY FKVAILFTIF SRVDENGENP 180 AWEAIGYNID KVENVPNERP LQQGIVETMH VIDSIDLHKL LTEKGLQVTQ DPHKNAIKIK 240 CDAVIVGSGC GGGVAAATLA SSGLKVVVLE KGCYFGPADY SPFEGPSMEK LYELGGSLPS 300 IDGQFAILAG STVGGGSAVN WSACIKTPES VLKEWTDECK IPVFGSNEYV SAMDIVCERI 360 GVTEDCEEEG FQNQVLCKGC KNLGFDIEKV PRNSSSRHYC GSCGFGCRRG DKKGTDKTWL 420 VDAVNNGTVI LTACKAEKFM LEQNTTMIST RKMKCTGVIA TTLNKNITKK LQIEAKVTIS 480 ACGALHTPLL MYSSGLKNPN IGRNLRLHPV LMSWGYFPDS DSDIEGKAVD GGIITSVHKV 540 LGPNNNVQAI IETPSLGPGQ YTALCPWVSG LDFKQRMLKF SRTAHLITIV KDRGSGEVHM 600 GGRVTYKFDA TDRENLRAGL RRSLRVLVAA GAVEVGTHRS DGQKLKCKGV SKEELEEFLD 660 TVFSVGGPLF WGDKWMVHTT AHQMGSCKMG RNEKDGGVDE NGESWEAEGL YVCDASVLPT 720 AIGVNPMITV MSTAYCLSKR IAAKIQNL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.008 | 603 | 746 | 147 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PRK02106 | PRK02106 | 0.0007 | 677 | 725 | 49 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 7.0e-23 | 603 | 737 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-24 | 234 | 745 | 586 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-84 | 288 | 510 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71289.1 | 0 | 9 | 746 | 8 | 736 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285334.1 | 0 | 9 | 746 | 8 | 736 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311685.1 | 0 | 9 | 746 | 8 | 742 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314488.1 | 0 | 32 | 745 | 1 | 713 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528823.1 | 0 | 13 | 746 | 11 | 743 | disulfide oxidoreductase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1kdg_B | 0.0008 | 242 | 509 | 9 | 284 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.0008 | 242 | 509 | 9 | 284 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1naa_B | 0.0009 | 242 | 509 | 4 | 279 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 625 | 122 | 743 | 0 |
| ES806453 | 294 | 409 | 702 | 0 |
| CO116772 | 290 | 115 | 404 | 0 |
| HO794753 | 39 | 53 | 91 | 0.16 |
| HO794753 | 20 | 27 | 46 | 0.16 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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