y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G259500.2 |
Family | GH3 |
Protein Properties | Length: 590 Molecular Weight: 63842.9 Isoelectric Point: 8.6036 |
Chromosome | Chromosome/Scaffold: 06 Start: 50048069 End: 50052943 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 80 | 326 | 0 |
DVPRLGIRGYEWWSEALHGVSNVGPGTKFGGSFPGATSFPQVITTAASFNESLWERIGQVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGE DPVLAGKYAASYVRGLQSATGNRLKVAACCKHYTAYDLDNWKGVDRFHFNARVSKQDLADTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDLLKGT IRGQWHLNGYIVSDCDSVGVMYDTQHFTVTPEESAAATIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 590 Download |
MSRTTKRDSL TLLLLLLIAI LSISSVESGR PPFACDPRNG LTRSLRFCRT NLPIHVRVRD 60 LLGRLTLPEK IRLLVNNAID VPRLGIRGYE WWSEALHGVS NVGPGTKFGG SFPGATSFPQ 120 VITTAASFNE SLWERIGQVV SDEARAMYNG GMAGLTYWSP NVNIFRDPRW GRGQETPGED 180 PVLAGKYAAS YVRGLQSATG NRLKVAACCK HYTAYDLDNW KGVDRFHFNA RVSKQDLADT 240 YNVPFKACVV EGKVASVMCS YNQVNGKPTC ADPDLLKGTI RGQWHLNGYI VSDCDSVGVM 300 YDTQHFTVTP EESAAATIKA GLDLDCGPFL AIYTDLAIRR GLLTVTDVDM ALANTVTVQM 360 RLGMFDGEPS AQPYGHLGPR HVCTPDHKQL ALEAARQGIV LLKNSGSLPL STSRHRTVAV 420 IGPNSDVTET MIGNYAGVAC DYTSPLKGIS RYVRTVHQAG CSNVACKANN LFGFAEVAAR 480 HADATVLIMG LDQSIEAEFK DRAGLLLPGY QQELVTRVAQ ASKGPTILVL MSGGPIDVSF 540 AKYDRRVSAI LWAGYPGQAG GTAIADVLFG TTNPGKFNSL AQCRKYQTL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-46 | 399 | 575 | 185 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-56 | 76 | 449 | 380 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 1.0e-59 | 116 | 576 | 509 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 1.0e-63 | 61 | 328 | 272 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 0 | 27 | 575 | 561 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS17751.2 | 0 | 8 | 574 | 7 | 575 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAF79669.1 | 0 | 25 | 574 | 24 | 574 | beta-D-xylosidase [Pyrus pyrifolia] |
DDBJ | BAG28345.1 | 0 | 26 | 575 | 22 | 571 | arabinofuranosidase [Citrus unshiu] |
RefSeq | XP_002316021.1 | 0 | 26 | 575 | 22 | 570 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 26 | 575 | 36 | 585 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 9.94922e-44 | 116 | 579 | 91 | 567 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 3u48_A | 9.94922e-44 | 116 | 579 | 91 | 567 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 3u4a_B | 3.9937e-43 | 116 | 579 | 91 | 567 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 3u4a_A | 3.9937e-43 | 116 | 579 | 91 | 567 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 3ut0_D | 4e-34 | 91 | 576 | 107 | 571 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |