y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G260600.1 |
Family | CE8 |
Protein Properties | Length: 564 Molecular Weight: 61779.6 Isoelectric Point: 5.9386 |
Chromosome | Chromosome/Scaffold: 06 Start: 50124388 End: 50126586 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 247 | 542 | 0 |
DVVVAKDGSGKYDTITKALEEVPKKSPNRFVIHIKAGIYKEKINVTKQMTNVMFIGDGPTKTIITNDINCINNHPLKTFQTATVGVDGVGFMAKDIGFEN TAGPEGHQAVAFRATSNKVIMFNCHFTGYQDTLYPHKGQQFYRDCVISGTVDFIFGDSASVFQNCLIIVRKPGENQNNMITAPGRQYIDTDSALVLQNCT ITGAPDYLPVKDKSKTYLGRPWKPLARAIIMQSTIEDIITPEGYAPMEGTKGLDTAYFAEFENKGPGAKTEGRVTWPAIKKIDINEAKKWTPGVFL |
Full Sequence |
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Protein Sequence Length: 564 Download |
MANNVAVIGI CSVFLVAVVV AVVVGVSQTH TKEESDSKSN SISSSNKAVQ AVCQPTHFKD 60 ACEKSLASSN STDTKELIRS SFQAAIEEVR KVLANSTTIQ DLNKDDNNRE ALKVCQEVLD 120 LSIDDLQLSF DKMGEYDMSK IGDYLLNLRV WLSGALTTQQ TCVDTFAEVS NEQAEKMKLV 180 LKTSMELTAN ALTMVTKLST VLKDLNIPGL DGIDTTGFER KLLSNDGPEW MGHAERKLLQ 240 APIIKPDVVV AKDGSGKYDT ITKALEEVPK KSPNRFVIHI KAGIYKEKIN VTKQMTNVMF 300 IGDGPTKTII TNDINCINNH PLKTFQTATV GVDGVGFMAK DIGFENTAGP EGHQAVAFRA 360 TSNKVIMFNC HFTGYQDTLY PHKGQQFYRD CVISGTVDFI FGDSASVFQN CLIIVRKPGE 420 NQNNMITAPG RQYIDTDSAL VLQNCTITGA PDYLPVKDKS KTYLGRPWKP LARAIIMQST 480 IEDIITPEGY APMEGTKGLD TAYFAEFENK GPGAKTEGRV TWPAIKKIDI NEAKKWTPGV 540 FLGSDQWVPQ AGIPYYPDMV PVV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 7.0e-144 | 49 | 555 | 530 | + pectinesterase | ||
pfam01095 | Pectinesterase | 7.0e-155 | 247 | 545 | 300 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 3.0e-155 | 48 | 554 | 525 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 9.0e-172 | 48 | 559 | 516 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 1.0e-173 | 7 | 555 | 556 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22967.1 | 0 | 42 | 563 | 40 | 546 | unnamed protein product [Vitis vinifera] |
EMBL | CBI39537.1 | 0 | 36 | 555 | 46 | 570 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279123.1 | 0 | 36 | 555 | 46 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314364.1 | 0 | 31 | 560 | 43 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516960.1 | 0 | 39 | 562 | 58 | 579 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 240 | 555 | 1 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 244 | 555 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-20 | 247 | 549 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-20 | 247 | 549 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-20 | 247 | 549 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |