| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G269000.1 |
| Family | AA1 |
| Protein Properties | Length: 415 Molecular Weight: 46298.8 Isoelectric Point: 7.1663 |
| Chromosome | Chromosome/Scaffold: 06 Start: 50678133 End: 50682094 |
| Description | SKU5 similar 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 48 | 402 | 0 |
| SFFNGELPAQVVNATTNYNVAIDVLNQSDENLLMTWPGIQMQRNSWQNGVLGANCHIQPKKNFAYQFQVKDQIGSFSHFPSLNFQRASGGFGAIIINNRN VIAIPFALPDGHIVILIGDWYTQNPTALRTILGSGGVLINGKGPYRYNTTLVPAGIEYESINVDPGIHFFRCDGKNQNLPISCASTGLNFRIQGHKLLLV QTEGHYTTQQNFTSFDIHVGQSYSFLVTMDQNATTDYYIVASARFLNESAWERVTGVAISHIPIQKDQQLALCLFHQVIFTTQWSAMNQPRAIRQNTTPS GDRPNPQGSFHYGSIEVTDTYVLRSLPPLHAILNGISFVNPDTPIRLAEMHNVKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 415 Download |
| MIHIALLSSL CFAEDPYVLY DFKLSYITVF PLGVPQQVTF QFNLPYVSFF NGELPAQVVN 60 ATTNYNVAID VLNQSDENLL MTWPGIQMQR NSWQNGVLGA NCHIQPKKNF AYQFQVKDQI 120 GSFSHFPSLN FQRASGGFGA IIINNRNVIA IPFALPDGHI VILIGDWYTQ NPTALRTILG 180 SGGVLINGKG PYRYNTTLVP AGIEYESINV DPGIHFFRCD GKNQNLPISC ASTGLNFRIQ 240 GHKLLLVQTE GHYTTQQNFT SFDIHVGQSY SFLVTMDQNA TTDYYIVASA RFLNESAWER 300 VTGVAISHIP IQKDQQLALC LFHQVIFTTQ WSAMNQPRAI RQNTTPSGDR PNPQGSFHYG 360 SIEVTDTYVL RSLPPLHAIL NGISFVNPDT PIRLAEMHNV KGAYKLDLIM LCIK* 420 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02168 | PLN02168 | 8.0e-85 | 2 | 396 | 420 | + copper ion binding / pectinesterase |
| PLN02792 | PLN02792 | 4.0e-87 | 13 | 409 | 419 | + oxidoreductase |
| PLN02835 | PLN02835 | 7.0e-94 | 4 | 409 | 419 | + oxidoreductase |
| PLN02354 | PLN02354 | 9.0e-102 | 13 | 409 | 412 | + copper ion binding / oxidoreductase |
| PLN00044 | PLN00044 | 3.0e-129 | 4 | 408 | 431 | + multi-copper oxidase-related protein; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA23065.1 | 0 | 1 | 408 | 12 | 416 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
| RefSeq | NP_199961.1 | 0 | 6 | 408 | 16 | 415 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002318885.1 | 0 | 1 | 408 | 14 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321832.1 | 0 | 1 | 408 | 14 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510943.1 | 0 | 1 | 408 | 11 | 416 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 1e-24 | 51 | 404 | 28 | 388 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 1asq_A | 1e-24 | 51 | 404 | 28 | 388 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 1asp_B | 1e-24 | 51 | 404 | 28 | 388 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 1asp_A | 1e-24 | 51 | 404 | 28 | 388 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 1aso_B | 1e-24 | 51 | 404 | 28 | 388 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO796073 | 372 | 51 | 408 | 0 |
| DY295966 | 375 | 2 | 362 | 0 |
| FC896312 | 302 | 2 | 296 | 0 |
| DY357377 | 297 | 86 | 374 | 0 |
| FF347342 | 264 | 53 | 308 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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