Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G009300.1 |
Family | GT47 |
Protein Properties | Length: 468 Molecular Weight: 54315.8 Isoelectric Point: 8.2292 |
Chromosome | Chromosome/Scaffold: 07 Start: 729655 End: 731730 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 68 | 409 | 0 |
CSSGRIFVYNLPLVFNQELLDNCHELDPWNSRCEALSNGGLGRKATGLSGVVPEELIPAWYWTDQFAMEVIYHNRILNHKCRTMEPDSATAFYIPFYAGL AVGKYLWSNYTTKDRDRYCEMILDWVRDQPYWNRSDGWDHFTTMGRITWDFRRSKNEDWGSRCIYMPGMRNITRLLIERNPWDYFDVGVPYPSGFHPRSD SDIFQWQYFVRNRQRDTLFCFAGAPRGAVKNDFRGLLLNQCMNASGLCRVVDCAGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVF FWHRTAYLQYQWFLPNDPKSYSVFIHRDEVKNGTSIQSVLQR |
Full Sequence |
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Protein Sequence Length: 468 Download |
MPPNSSSDAI YSTTKTNSSS SSLQLQPFSF LWLLLFIVSL QVTILIMARA VPFYNRRTHF 60 PNPVSDPCSS GRIFVYNLPL VFNQELLDNC HELDPWNSRC EALSNGGLGR KATGLSGVVP 120 EELIPAWYWT DQFAMEVIYH NRILNHKCRT MEPDSATAFY IPFYAGLAVG KYLWSNYTTK 180 DRDRYCEMIL DWVRDQPYWN RSDGWDHFTT MGRITWDFRR SKNEDWGSRC IYMPGMRNIT 240 RLLIERNPWD YFDVGVPYPS GFHPRSDSDI FQWQYFVRNR QRDTLFCFAG APRGAVKNDF 300 RGLLLNQCMN ASGLCRVVDC AGTRCSNGTS AILETFLDSD FCLQPRGDSF TRRSIFDCMV 360 AGSIPVFFWH RTAYLQYQWF LPNDPKSYSV FIHRDEVKNG TSIQSVLQRY SREEVKKMRE 420 KVIEFIPKII YAKPENGLES IKDAFDVAID GVLKRNKEHE QPGYKWK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-52 | 67 | 410 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 68 | 467 | 118 | 517 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 17 | 466 | 25 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 31 | 466 | 49 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 33 | 466 | 52 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 32 | 466 | 50 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |