| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G015300.1 |
| Family | CE8 |
| Protein Properties | Length: 607 Molecular Weight: 66374.3 Isoelectric Point: 8.0912 |
| Chromosome | Chromosome/Scaffold: 07 Start: 1200657 End: 1204138 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 295 | 588 | 0 |
| IIVSKNGTVKTISEAIKKAPENSTRRIIIYVRAGRYEEKDLKVGRKKINLMFIGDGKGKTIISGGKSIFDNITTFHTAAFAATGAGFIARDMTFENWAGP AKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSIYARKPMALQKNTITAQNRKDPNQNTGISIHACRILPA SDLVASNGSFETYLGRPWKLYSRVVFMLSYMNNHVHPKGWLEWNTTFALDTLYYGEYMNYGPGAAIGQRIGWPGYRVITSEIEANKFTVQQFIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 607 Download |
| MGYDLLRRPE FESSGDHRQQ REEEGEEPRP DNKKNRLVIV SVIALGMIVV SAVCAGLAIV 60 LREGAADRVG GGGGGGVLVH RKPTRAISKT CSKARFPSLC VNSLLEFPGS LAASEQDLVH 120 ISFNMTLRHF SQALYTTASI SYVQMDPRVR SAFDDCLELL EDSVDALSRS LSSVVPSQDG 180 GYKGSSSQDV MTWLSAALTN HDTCTEGFEG VSGTVKDQVA AKLNDLAELV SNCLSIFAAS 240 GGDDFGGVPV QNRRLLASGD DLSGENVDED KFPKWLGRKE RVLLNTPVSA IQADIIVSKN 300 GTVKTISEAI KKAPENSTRR IIIYVRAGRY EEKDLKVGRK KINLMFIGDG KGKTIISGGK 360 SIFDNITTFH TAAFAATGAG FIARDMTFEN WAGPAKHQAV ALRVGADHAV VYRCNIIGYQ 420 DTLYVHSNRQ FYRECDIYGT VDFIFGNAAV VFQNCSIYAR KPMALQKNTI TAQNRKDPNQ 480 NTGISIHACR ILPASDLVAS NGSFETYLGR PWKLYSRVVF MLSYMNNHVH PKGWLEWNTT 540 FALDTLYYGE YMNYGPGAAI GQRIGWPGYR VITSEIEANK FTVQQFIYGS SWLPSTGVAF 600 LAGLQV* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02314 | PLN02314 | 4.0e-148 | 33 | 600 | 587 | + pectinesterase |
| PLN02201 | PLN02201 | 2.0e-159 | 122 | 606 | 489 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02301 | PLN02301 | 3.0e-162 | 83 | 604 | 530 | + pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 9.0e-166 | 294 | 590 | 299 | + Pectinesterase. |
| PLN02484 | PLN02484 | 0 | 32 | 606 | 578 | + probable pectinesterase/pectinesterase inhibitor |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42038.1 | 0 | 79 | 606 | 81 | 617 | pectin methylesterase 1 [Pyrus communis] |
| RefSeq | NP_190491.1 | 0 | 81 | 606 | 81 | 598 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002278061.1 | 0 | 68 | 606 | 57 | 597 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
| RefSeq | XP_002317777.1 | 0 | 64 | 604 | 14 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321999.1 | 0 | 78 | 606 | 78 | 605 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 289 | 604 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 291 | 604 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-22 | 290 | 595 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-22 | 290 | 595 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 7e-22 | 290 | 595 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
