y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G052900.2 |
Family | AA1 |
Protein Properties | Length: 446 Molecular Weight: 49140.1 Isoelectric Point: 8.5338 |
Chromosome | Chromosome/Scaffold: 07 Start: 3682379 End: 3685656 |
Description | SKU5 similar 17 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 38 | 445 | 0 |
GTRSILGVPQQVILINGQFPGPKLDVVTNNNIILNLMNKLDQPFLMTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQAKDQIGSYTYFPSTLMHRAA GGFGALNIIHRSVIPIPYANPDGDFTLLLGDWFKTNHKTLQQSLESGKSMPFPDGVLINGQTQATFTGDQGKTYMFRISNVGLSTSLNFRIQGHKMKLVE VEGSHVIQNLYDSLDVHVGQSITILVTLDQPPKDYYIVASTRFTKTVLTATAVLHYANSNAPVSGPVPAAPANGFDWSMEQARTYRWNLTSNAARPNPQG SFHYGTITPTKTIVLANSAPLINGKLRYAVNGVSYINPDTPLKLADYFNIPGVFSMNSLSELPSGRAATLATSVMATSLHDFIEVVFQNNENTMQAWHLD GYDFWVVG |
Full Sequence |
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Protein Sequence Length: 446 Download |
MVKCFIPHLV FGVLAVLGVS LVNAEDPYLY FTWTVTYGTR SILGVPQQVI LINGQFPGPK 60 LDVVTNNNII LNLMNKLDQP FLMTWNGIKQ RKNSWQDGVL GTNCPIPPNS NYTYKFQAKD 120 QIGSYTYFPS TLMHRAAGGF GALNIIHRSV IPIPYANPDG DFTLLLGDWF KTNHKTLQQS 180 LESGKSMPFP DGVLINGQTQ ATFTGDQGKT YMFRISNVGL STSLNFRIQG HKMKLVEVEG 240 SHVIQNLYDS LDVHVGQSIT ILVTLDQPPK DYYIVASTRF TKTVLTATAV LHYANSNAPV 300 SGPVPAAPAN GFDWSMEQAR TYRWNLTSNA ARPNPQGSFH YGTITPTKTI VLANSAPLIN 360 GKLRYAVNGV SYINPDTPLK LADYFNIPGV FSMNSLSELP SGRAATLATS VMATSLHDFI 420 EVVFQNNENT MQAWHLDGYD FWVVG* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 1.0e-156 | 1 | 445 | 452 | + copper ion binding / pectinesterase | ||
PLN02991 | PLN02991 | 8.0e-174 | 19 | 445 | 428 | + oxidoreductase | ||
PLN02792 | PLN02792 | 2.0e-175 | 13 | 445 | 438 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 1 | 445 | 446 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 9 | 445 | 447 | + copper ion binding / oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN72538.1 | 0 | 1 | 445 | 41 | 499 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18560.1 | 0 | 1 | 445 | 1 | 442 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270831.1 | 0 | 1 | 445 | 2 | 443 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310162.1 | 0 | 1 | 445 | 1 | 445 | multicopper oxidase [Populus trichocarpa] |
RefSeq | XP_002522337.1 | 0 | 23 | 445 | 24 | 446 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 6.00036e-42 | 30 | 445 | 5 | 458 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1asq_A | 6.00036e-42 | 30 | 445 | 5 | 458 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1asp_B | 6.00036e-42 | 30 | 445 | 5 | 458 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1asp_A | 6.00036e-42 | 30 | 445 | 5 | 458 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1aso_B | 6.00036e-42 | 30 | 445 | 5 | 458 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |