| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G064900.1 |
| Family | CE8 |
| Protein Properties | Length: 578 Molecular Weight: 63339.6 Isoelectric Point: 8.5114 |
| Chromosome | Chromosome/Scaffold: 07 Start: 4562035 End: 4564923 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 262 | 569 | 0 |
| DVTVCKDGRGGCYKTVQEAVNAAPAPANAESTRRFVIYIKEGVYEETVRVPLEKKNVVFLGDGMGKTIIAGALNAGMPGLTTYETATVGVLGDGFMASGL TIRNTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLYAHSLRQFYRKCRIQGNVDFIFGNSASVFQDCEILVAPRQVKPEKGENNAVTAHGRTDPAQST GLVFQNCLINGTDEYMRYYYSKPKVHKNFLGRPWKEYSRTVFINCVMEALINPNGWMPWKGDFALKTLFYGEFGNSGLGSIPLNRVPWSTQIPPQHVHTF SVQNFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 578 Download |
| MHSSSPPPSH QSHKKHPRRN PWNSTSLLVS LSMSAFLLLS LLSLSHFFIF SSSSHHPPHN 60 SPVYASDSSR IRLACKSTRF PQPCESSLSR SSLLPPNPTS LQFIQSAISV SSDNLKTGQS 120 MVKSILDSSK GNLNRSNAAA ICLNILSNSD YRIRSTNAAL ARGKIKDARA WMSAALCYQY 180 DCWSALKYVN DTKLVGETMA FLDSLTQHSS NALSMMVAYD NIGEDIAAWV PPKTERDGFY 240 ENGSGGTELG FNGGLPSNLK TDVTVCKDGR GGCYKTVQEA VNAAPAPANA ESTRRFVIYI 300 KEGVYEETVR VPLEKKNVVF LGDGMGKTII AGALNAGMPG LTTYETATVG VLGDGFMASG 360 LTIRNTAGPD AHQAVAFRSD SDLSVIENCE FLGNQDTLYA HSLRQFYRKC RIQGNVDFIF 420 GNSASVFQDC EILVAPRQVK PEKGENNAVT AHGRTDPAQS TGLVFQNCLI NGTDEYMRYY 480 YSKPKVHKNF LGRPWKEYSR TVFINCVMEA LINPNGWMPW KGDFALKTLF YGEFGNSGLG 540 SIPLNRVPWS TQIPPQHVHT FSVQNFIQGD QWIPTSS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 3.0e-107 | 143 | 576 | 471 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 7.0e-109 | 125 | 576 | 460 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 8.0e-110 | 132 | 573 | 462 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-154 | 262 | 570 | 312 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 55 | 577 | 533 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_196538.1 | 0 | 61 | 577 | 33 | 551 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002281640.1 | 0 | 34 | 577 | 3 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 54 | 577 | 27 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 50 | 577 | 26 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 52 | 577 | 22 | 552 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 257 | 577 | 3 | 312 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 262 | 576 | 4 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-19 | 271 | 522 | 15 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-19 | 271 | 522 | 15 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-19 | 271 | 522 | 15 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
