y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G099100.6 |
Family | GH14 |
Protein Properties | Length: 573 Molecular Weight: 63751.2 Isoelectric Point: 5.2786 |
Chromosome | Chromosome/Scaffold: 07 Start: 7318668 End: 7324017 |
Description | beta-amylase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 263 | 544 | 0 |
YVMLPLGVVNMKCELVDPDGLLKQLRVLKSINVDGVMIDCWWGIVEADAPQEYNWNGYRRLFQMVHELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRSNPDIFFTDREGRRNTECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFNEFFEDGIISMVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYML KSLMKAAEMRGHSFWARGPDNAGSYSSHPHETGFFCDEGDYDGYYGRFFLNWYSQLLINHGDLVLSLAKLAFEGSCIAAKVS |
Full Sequence |
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Protein Sequence Length: 573 Download |
MSADMQKLIG ANEEDDEEEI EMDVKEEDNE DHENGQKHIA AQMMLGADGV MPSTSHQFQI 60 QQQLQEQVST PGGGARRSRP LEEKERTKLR ERHRRAITAR ILAGLRKHGN YNLRVRADIN 120 DVIAALAREA GWVVLPDGTT FPSRSQGSRP AGDSSAGLTS SSSQMLSQQV PPTSLQGVSS 180 GYCASVEYNA CHMKGVFMPT PAPYDLSSSG HSQSSGMVGN GGEQTESLPL IAGSMEVINE 240 QIIGLPPKLP ERDFAGTPYV PVYVMLPLGV VNMKCELVDP DGLLKQLRVL KSINVDGVMI 300 DCWWGIVEAD APQEYNWNGY RRLFQMVHEL KLKLQVVMSF HECGGNVGDD VCIPLPHWVA 360 EIGRSNPDIF FTDREGRRNT ECLSWGIDKE RVLRGRTAVE VYFDFMRSFR VEFNEFFEDG 420 IISMVEVGLG PCGELRYPSC PVKHGWRYPG IGEFQCYDQY MLKSLMKAAE MRGHSFWARG 480 PDNAGSYSSH PHETGFFCDE GDYDGYYGRF FLNWYSQLLI NHGDLVLSLA KLAFEGSCIA 540 AKVSLPAPVS YTQVNILLLP SKVDFKIHCL AR* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 7.0e-99 | 260 | 544 | 290 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-113 | 260 | 544 | 287 | + beta-amylase | ||
PLN02801 | PLN02801 | 4.0e-126 | 259 | 544 | 289 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 1 | 544 | 549 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 96 | 547 | 455 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28536.1 | 0 | 1 | 543 | 1 | 531 | putative beta-amylase [Arabidopsis thaliana] |
EMBL | CBI40368.1 | 0 | 44 | 544 | 1 | 504 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_182112.2 | 0 | 1 | 543 | 1 | 531 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002273843.1 | 0 | 1 | 544 | 1 | 546 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511857.1 | 0 | 1 | 544 | 4 | 551 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdr_A | 0 | 259 | 544 | 11 | 297 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 259 | 544 | 11 | 297 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1wdp_A | 0 | 259 | 544 | 11 | 297 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6c_A | 0 | 259 | 544 | 11 | 297 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 259 | 544 | 11 | 297 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG638376 | 267 | 268 | 534 | 0 |
DT587209 | 255 | 276 | 530 | 0 |
HO064443 | 239 | 248 | 486 | 0 |
DT743760 | 240 | 268 | 507 | 0 |
EH764943 | 251 | 241 | 491 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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