y
Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.007G099200.1 |
Family | GH14 |
Protein Properties | Length: 537 Molecular Weight: 60734.8 Isoelectric Point: 6.6253 |
Chromosome | Chromosome/Scaffold: 07 Start: 7324376 End: 7328400 |
Description | beta-amylase 2 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH14 | 101 | 518 | 0 |
YVMLPLGVIDRNCELVDPEGLTNQLRILKSVNVDGVMIDCWWGIVEAHAPQTYNWSGYRRLFQIVRDIGLKLQVVMSFHECGGNVGDDVNIPLPQWVREI GDSNPDIYFTDREGRRNTECLTWGIDKERVLRGRTAVEVYFDYMRNFRVEFDDFFVSGVIAEIEVGMGPCGELRYPSYLVKHGWKYPGIGEFQCYDKYLM KRLKKAAEIRGHTFWGRAPYNSGSYNSAPHETGFFRDGGDYDSYYGRFFLNWYSQILVDHGDRVLALANLAFEGTCIAAKLSGIHWWYKTASHAAELTSG FYNPAHRDGYALIAAMLKKHGVALNFTCVELRTLNQHEGFPEAMADPEGLVWQVLNAAWDVSIPVASENALPCYDREGYNKILENAKPRNDPDGRHLSAF TYLRLNPALIERRNFVEF |
Full Sequence |
---|
Protein Sequence Length: 537 Download |
MAVSSVRLFN SLYPPCASLI AYSTLHSGFP NSLRYNSFRV KGGLVYSISG SSRVRALVKG 60 KGERTEDYPL AGDSTDDTKV AESWPRSLQR DFAGTPYVPV YVMLPLGVID RNCELVDPEG 120 LTNQLRILKS VNVDGVMIDC WWGIVEAHAP QTYNWSGYRR LFQIVRDIGL KLQVVMSFHE 180 CGGNVGDDVN IPLPQWVREI GDSNPDIYFT DREGRRNTEC LTWGIDKERV LRGRTAVEVY 240 FDYMRNFRVE FDDFFVSGVI AEIEVGMGPC GELRYPSYLV KHGWKYPGIG EFQCYDKYLM 300 KRLKKAAEIR GHTFWGRAPY NSGSYNSAPH ETGFFRDGGD YDSYYGRFFL NWYSQILVDH 360 GDRVLALANL AFEGTCIAAK LSGIHWWYKT ASHAAELTSG FYNPAHRDGY ALIAAMLKKH 420 GVALNFTCVE LRTLNQHEGF PEAMADPEGL VWQVLNAAWD VSIPVASENA LPCYDREGYN 480 KILENAKPRN DPDGRHLSAF TYLRLNPALI ERRNFVEFER FVKGMHGEAI SDLPLN* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 6.0e-155 | 98 | 525 | 435 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-174 | 98 | 525 | 432 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 2 | 535 | 544 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 89 | 528 | 441 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 97 | 528 | 439 | + beta-amylase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40368.1 | 0 | 25 | 535 | 137 | 657 | unnamed protein product [Vitis vinifera] |
EMBL | CBI40370.1 | 0 | 12 | 533 | 26 | 546 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273843.1 | 0 | 25 | 535 | 179 | 699 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274612.1 | 0 | 12 | 533 | 26 | 572 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511858.1 | 0 | 1 | 528 | 1 | 534 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1byd_A | 0 | 97 | 528 | 11 | 444 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
PDB | 1byc_A | 0 | 97 | 528 | 11 | 444 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
PDB | 1byb_A | 0 | 97 | 528 | 11 | 444 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
PDB | 1bya_A | 0 | 97 | 528 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
PDB | 1wdp_A | 0 | 97 | 528 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DV466053 | 275 | 258 | 532 | 0 |
DV021150 | 292 | 183 | 474 | 0 |
CO447286 | 289 | 175 | 463 | 0 |
GO367915 | 286 | 109 | 394 | 0 |
GR062214 | 263 | 141 | 403 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|