Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G110500.1 |
Family | AA1 |
Protein Properties | Length: 575 Molecular Weight: 63710.6 Isoelectric Point: 6.785 |
Chromosome | Chromosome/Scaffold: 07 Start: 8404300 End: 8407062 |
Description | laccase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 36 | 561 | 0 |
TRFYDFKVQTLRVTKLCNTKEIVTINRMFPGPVIYAQEDDRIIVKVTNVTPYNATIHWHGVRQKLSCWFDGPSYITQCPIQAGQTFTYEFTLVKQKGTFF WHAHVSWLRATAHGAIVVYPKTGIPYPFKQPYEEHIIILGEYWLRDVVQLERQVLASGGAAPPADAFTINGHPGPNYNCSRNDVYRIEVVPGKTYLLRLI NAGLNMENFFAIAYHNLTVVEVDAEYTKSFTTDSVMLGPGQTMNVLVTADQPIGKYSMAMGPYMSAQNVSFQNISAIAYFQYLGAAPNCLSLPAKLPRFN DSLAVMTVMDGLRSLNPVDVPKEIDASLFVTVGLNINKCQSKTPQWNCQGTNNGTFAASMNNISFVNPTVSVLEAYYKKIGGHFTEDFPDSPLKFYDFVN GAPNNAPNNTQATNGTRTKVLEYGSRVQVIFQDTGTVTTENHPIHLHGYSFYVVGYGTGNFNPQTADFNLIDPPYMNTIGVPVGGWAAIQFVADNPGVWF MHCHLDIHQSWGLGAVLIVENGKGEL |
Full Sequence |
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Protein Sequence Length: 575 Download |
MANLATSMLL CLSLSMSYYL QAFHAMAHEW PGGGSTRFYD FKVQTLRVTK LCNTKEIVTI 60 NRMFPGPVIY AQEDDRIIVK VTNVTPYNAT IHWHGVRQKL SCWFDGPSYI TQCPIQAGQT 120 FTYEFTLVKQ KGTFFWHAHV SWLRATAHGA IVVYPKTGIP YPFKQPYEEH IIILGEYWLR 180 DVVQLERQVL ASGGAAPPAD AFTINGHPGP NYNCSRNDVY RIEVVPGKTY LLRLINAGLN 240 MENFFAIAYH NLTVVEVDAE YTKSFTTDSV MLGPGQTMNV LVTADQPIGK YSMAMGPYMS 300 AQNVSFQNIS AIAYFQYLGA APNCLSLPAK LPRFNDSLAV MTVMDGLRSL NPVDVPKEID 360 ASLFVTVGLN INKCQSKTPQ WNCQGTNNGT FAASMNNISF VNPTVSVLEA YYKKIGGHFT 420 EDFPDSPLKF YDFVNGAPNN APNNTQATNG TRTKVLEYGS RVQVIFQDTG TVTTENHPIH 480 LHGYSFYVVG YGTGNFNPQT ADFNLIDPPY MNTIGVPVGG WAAIQFVADN PGVWFMHCHL 540 DIHQSWGLGA VLIVENGKGE LETLPHPPAD LPRC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03388 | ascorbase | 0.003 | 525 | 564 | 40 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
PLN02191 | PLN02191 | 2.0e-59 | 52 | 553 | 547 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-76 | 34 | 565 | 574 | + oxidoreductase | ||
TIGR03388 | ascorbase | 7.0e-79 | 36 | 551 | 565 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 34 | 574 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN75876.1 | 0 | 1 | 574 | 1 | 571 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_182180.1 | 0 | 33 | 574 | 28 | 569 | LAC6 (laccase 6); laccase [Arabidopsis thaliana] |
RefSeq | XP_002264410.1 | 0 | 1 | 574 | 1 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320207.1 | 0 | 46 | 574 | 1 | 529 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523314.1 | 0 | 30 | 574 | 28 | 572 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 37 | 552 | 4 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asq_A | 0 | 37 | 552 | 4 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asp_B | 0 | 37 | 552 | 4 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |