Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G119100.3 |
Family | GH5 |
Protein Properties | Length: 371 Molecular Weight: 42026.5 Isoelectric Point: 7.2655 |
Chromosome | Chromosome/Scaffold: 07 Start: 9388601 End: 9391741 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 49 | 316 | 5.3e-21 |
NGKPFYLNGFNAYWMMMFASDNSTRSKVTDAFREASKYGMNIARTWAFNDGDYKPLQNSPGSYNEDVFKGLDFVVAEANKYGIHLILSLANNFKDFGGKD KYVQWAKQRGRNLSKEDDFFTDSVVKKYYKNHITNWVKEMAAHVKSIDNYHLLEIGLEGFYGESMPEKKQYNPNSYSIGTDFISNNQIPEVDFATIHIYP EQWLPSTNSSEEAQLGFVDKWIEAHTMDCNSVLKKPLVIGEFGKSFKLPGYSLEKRNEYFQRIYKAIY |
Full Sequence |
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Protein Sequence Length: 371 Download |
MKASHWFNSF IVLLVLILTM DFRHGIYYAR ADAGGTGFVQ TTATKFVING KPFYLNGFNA 60 YWMMMFASDN STRSKVTDAF REASKYGMNI ARTWAFNDGD YKPLQNSPGS YNEDVFKGLD 120 FVVAEANKYG IHLILSLANN FKDFGGKDKY VQWAKQRGRN LSKEDDFFTD SVVKKYYKNH 180 ITNWVKEMAA HVKSIDNYHL LEIGLEGFYG ESMPEKKQYN PNSYSIGTDF ISNNQIPEVD 240 FATIHIYPEQ WLPSTNSSEE AQLGFVDKWI EAHTMDCNSV LKKPLVIGEF GKSFKLPGYS 300 LEKRNEYFQR IYKAIYSSAR NGGSCDGGLF WQLLSLGMDN MGDGYQVVLE QSPSTASVIA 360 QQSRLLSSLT * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 7.0e-15 | 46 | 353 | 351 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG88068.1 | 0 | 10 | 370 | 14 | 410 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 39 | 370 | 45 | 416 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
EMBL | CAC51690.3 | 0 | 38 | 369 | 26 | 396 | endo-beta-1,4-mannanase [Lactuca sativa] |
RefSeq | XP_002302695.1 | 0 | 6 | 368 | 3 | 402 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 14 | 369 | 9 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 38 | 370 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3ziz_A | 9e-30 | 40 | 369 | 17 | 357 | A Chain A, Crystal Structure Of Podospora Anserina Gh5 Beta-(1,4)-mannanase |
PDB | 3pzq_A | 2e-29 | 47 | 366 | 21 | 383 | A Chain A, Crystal Structure Of Podospora Anserina Gh5 Beta-(1,4)-mannanase |
PDB | 3pzo_A | 2e-29 | 47 | 366 | 21 | 383 | A Chain A, Crystal Structure Of Podospora Anserina Gh5 Beta-(1,4)-mannanase |
PDB | 3pzn_A | 2e-29 | 47 | 366 | 21 | 383 | A Chain A, Crystal Structure Of Podospora Anserina Gh5 Beta-(1,4)-mannanase |