| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G127000.1 |
| Family | CE8 |
| Protein Properties | Length: 561 Molecular Weight: 62041.8 Isoelectric Point: 9.2375 |
| Chromosome | Chromosome/Scaffold: 07 Start: 10119253 End: 10122485 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 249 | 544 | 0 |
| LIVAKDGTGNFTTINDAVAAAPNNSNTRFVIYIKAGSYLENVEVVKKKKMLMFVGDGIGKTVVKASRNVVDGFTTFRSATVAVVGEGFIAKGITFENSAG PSKHQAVALRSGSDLSAFYKCSFVAYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYARKPNPNQKNIFTAQGREDPNQNTGISILNCKIAA AADLVPVKSSFKTYLGRPWKEYSRTVIMRSYIDDSVDPAGWLEWNGTFALSTLYYGEYLNRGPGSNTSARVTWPGYRVINSSTEATQFTIEPFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 561 Download |
| MYHPSARSKT LLVLLPISAL VLVLLSFVAL LTNSPRATQL QHLHVHNHLQ IAHSACEATL 60 YPDLCVSTIS VLPDLASKSL PELIQATLNQ TMYEVRLSSA NCTGIEKRIK SYSKREEAAI 120 NDCLELFDDT LEELKVALAD LAPKKLAVSR NYHDLQTFLS AAMTNQYTCL DGFARSKGNV 180 RNIIKKGLHN ITHHVSNSLV MLKKVPGVNK SKSEYFPQQG RLKNGFPSWL SRKDRKLLQA 240 SVNETEFDLI VAKDGTGNFT TINDAVAAAP NNSNTRFVIY IKAGSYLENV EVVKKKKMLM 300 FVGDGIGKTV VKASRNVVDG FTTFRSATVA VVGEGFIAKG ITFENSAGPS KHQAVALRSG 360 SDLSAFYKCS FVAYQDTLYV HSLRQFYREC DIYGTVDFIF GNAAVVFQDC NLYARKPNPN 420 QKNIFTAQGR EDPNQNTGIS ILNCKIAAAA DLVPVKSSFK TYLGRPWKEY SRTVIMRSYI 480 DDSVDPAGWL EWNGTFALST LYYGEYLNRG PGSNTSARVT WPGYRVINSS TEATQFTIEP 540 FIQGNEWLNS SNIPFALGLN * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02933 | PLN02933 | 0 | 77 | 559 | 492 | + Probable pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 0 | 248 | 545 | 298 | + Pectinesterase. |
| PLN02301 | PLN02301 | 0 | 51 | 559 | 511 | + pectinesterase/pectinesterase inhibitor |
| PLN02713 | PLN02713 | 0 | 54 | 560 | 541 | + Probable pectinesterase/pectinesterase inhibitor |
| PLN02484 | PLN02484 | 0 | 55 | 560 | 516 | + probable pectinesterase/pectinesterase inhibitor |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACQ85264.1 | 0 | 41 | 560 | 44 | 565 | pectin methylesterase [Musa acuminata AAA Group] |
| EMBL | CBI36883.1 | 0 | 7 | 533 | 17 | 498 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002271665.1 | 0 | 1 | 555 | 1 | 559 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301486.1 | 0 | 116 | 560 | 7 | 450 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523113.1 | 0 | 1 | 560 | 1 | 557 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 248 | 559 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 250 | 559 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-22 | 245 | 467 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-22 | 245 | 467 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-22 | 245 | 467 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
