Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G150100.1 |
Family | GT47 |
Protein Properties | Length: 576 Molecular Weight: 66341.8 Isoelectric Point: 8.1864 |
Chromosome | Chromosome/Scaffold: 07 Start: 12706614 End: 12709234 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 118 | 458 | 0 |
GGRYIYVHNLPPRFNEDMLKECKSLSLWTNMCKFTSNEGLGPPLENVEGVFENTGWYATNQFAVDVIFNNRMKHYECLTNDSSIAAAIFVPFYAGFDIAR YLWGYNISRRDAASLDLVDWLMKRPEWGIMGGKDHFLVAGRITWDFRRLTEEESDWGNKLLFLPAARSMSMLVVESSPWNANDFGIPYPTYFHPAKDEEV FVWQDRMRNLERKWLFSFAGAPRPGNPKSIRGQIIDQCRQSKVCKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHP GSAYTQYTWHLPKNYTTYSVFIPEDDIRKRNVSIEERLSQI |
Full Sequence |
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Protein Sequence Length: 576 Download |
MRRRPVALAP FEAMEKGSPK NQQTRLCFLA SLSAFFWILL LYFHFVVLGR STTIEDSVPS 60 PPFKLVSPIV NVESIPARVT KEKPPVVKPV MNTAAEKVVA YPFMRALRTV ENKSDPCGGR 120 YIYVHNLPPR FNEDMLKECK SLSLWTNMCK FTSNEGLGPP LENVEGVFEN TGWYATNQFA 180 VDVIFNNRMK HYECLTNDSS IAAAIFVPFY AGFDIARYLW GYNISRRDAA SLDLVDWLMK 240 RPEWGIMGGK DHFLVAGRIT WDFRRLTEEE SDWGNKLLFL PAARSMSMLV VESSPWNAND 300 FGIPYPTYFH PAKDEEVFVW QDRMRNLERK WLFSFAGAPR PGNPKSIRGQ IIDQCRQSKV 360 CKLLECDFGE SKCHSPSSIM QMFQSSLFCL QPQGDSYTRR SAFDSMLAGC IPVFFHPGSA 420 YTQYTWHLPK NYTTYSVFIP EDDIRKRNVS IEERLSQISP EQVKIMREAV INLIPRLIYA 480 DPRSKLETLR DAFDVAVDAV INKVTKLRRN IIQGRTEYDN FVEENSWKYD LLDEGQREVG 540 AHEWDPFFSK PKDERRDQSA KAAKNSWKNE QRDQS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-67 | 116 | 458 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 1 | 575 | 1 | 617 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 1 | 575 | 7 | 618 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 1 | 575 | 7 | 618 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002269766.1 | 0 | 1 | 562 | 59 | 652 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 14 | 575 | 1 | 585 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |