Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G164400.1 |
Family | GT47 |
Protein Properties | Length: 492 Molecular Weight: 56182.4 Isoelectric Point: 8.5035 |
Chromosome | Chromosome/Scaffold: 07 Start: 14457188 End: 14459100 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 173 | 438 | 0 |
KLFKIYVYQEGEPPMFHNGPCKSIYSSEGRFIHEVEKGKFYTTQDPDEALVYFLPFSVAMLVRYLYESESLKTDAIGRIVIDYIHVISGKYPYWNRSLGA DHFMLSCHDWSIRVLCNANTSEGFTPAKDASFPEINLLKGEADIGGLPPSRRSILAFFAGHLHGYIRYLLLNEWKDKNDPDVQVYDQLPKGVSYMSKLKN SRFCLCPSGYEVASPRIVEAIYAECVPVLISDGYVAPFSDVLNWNSFSVQITVKDIPNIKRILMGI |
Full Sequence |
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Protein Sequence Length: 492 Download |
MMISPHNDKA QHTHISSFRS SPSLNLGLIL VIPSVVLLVL VSTLVPHPST FSPLSSPWKW 60 RYGGHWYSSI FNGSSTDSPF MEAETDELAP NMSFSDALID KDVDNVTSTT RVVKRSSKLE 120 MLEAYMARAR SSIKEAARVR NLTSIHQDPD YVPHGPIYRN ANAFHRSYLE MEKLFKIYVY 180 QEGEPPMFHN GPCKSIYSSE GRFIHEVEKG KFYTTQDPDE ALVYFLPFSV AMLVRYLYES 240 ESLKTDAIGR IVIDYIHVIS GKYPYWNRSL GADHFMLSCH DWSIRVLCNA NTSEGFTPAK 300 DASFPEINLL KGEADIGGLP PSRRSILAFF AGHLHGYIRY LLLNEWKDKN DPDVQVYDQL 360 PKGVSYMSKL KNSRFCLCPS GYEVASPRIV EAIYAECVPV LISDGYVAPF SDVLNWNSFS 420 VQITVKDIPN IKRILMGISH RQYLRMQRRV KQVQRHFVVN PTPKRYDVFH MINHSIWLRR 480 LNVHIQDFGV P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-58 | 171 | 438 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU04753.1 | 0 | 166 | 487 | 7 | 343 | EXO [Cucumis melo] |
EMBL | CBI28483.1 | 0 | 141 | 487 | 55 | 416 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264076.1 | 0 | 171 | 487 | 1 | 332 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320538.1 | 0 | 171 | 487 | 1 | 332 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524591.1 | 0 | 49 | 488 | 46 | 505 | catalytic, putative [Ricinus communis] |