Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.007G198900.1 |
Family | GH35 |
Protein Properties | Length: 860 Molecular Weight: 95818.7 Isoelectric Point: 7.4506 |
Chromosome | Chromosome/Scaffold: 07 Start: 20212694 End: 20217983 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 36 | 338 | 0 |
VINGQRRILFSGSIHYPRSTPEMWEDLIQKAKDGGVDVIETYVFWNVHEPSPGNYNFEGRYDLVRFVKTIQRAGLYAHLRIGPYVCAEWNFGGFPVWLKY VRGISFRTDNEPFKRAMQGFTEKIVGLMKSHNLYESQGGPIILSQIENEYGAQSKLLGAVGYNYVSWAAKMAIETETGVPWVMCKEQDAPDPVINTCNGF YCDSFQPNKPYKPTMWTEAWSGWFSEFGGPLHHRPAEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLIRQPKYGHLKE LHR |
Full Sequence |
---|
Protein Sequence Length: 860 Download |
MERSSCSRLL IVFCFALCLE CQLVQCSVTY DRKAIVINGQ RRILFSGSIH YPRSTPEMWE 60 DLIQKAKDGG VDVIETYVFW NVHEPSPGNY NFEGRYDLVR FVKTIQRAGL YAHLRIGPYV 120 CAEWNFGGFP VWLKYVRGIS FRTDNEPFKR AMQGFTEKIV GLMKSHNLYE SQGGPIILSQ 180 IENEYGAQSK LLGAVGYNYV SWAAKMAIET ETGVPWVMCK EQDAPDPVIN TCNGFYCDSF 240 QPNKPYKPTM WTEAWSGWFS EFGGPLHHRP AEDLAFAVAR FIQKGGSFVN YYMYHGGTNF 300 GRTAGGPFIT TSYDYDAPID EYGLIRQPKY GHLKELHRAI KMCERALVSD YPIVTSLGDL 360 QQAYMYTSES GDCAAFLSNY DTKSAARVLF NNMHYNLPPW SISILPDCRN AVFNTAKVGV 420 QTSQMQMLPT NSETFSWESY DEDPSSLDYS SAITADGLLE QINVTRDASD YLWYITSVDI 480 GSSESFLHGG ELPTLIVQST GHAVHVFING QLSDMVITGS AFGTRQNRRF TYTGKVNLRA 540 GTNKIALLSV AVGLPNVGGH YETWNTGILG PVALHGLDQG KWDLSRQKWT YQVGLKGEAM 600 DLVSPNGFSS VEWMAASLVA QKPEPLRWHK AYFNAPEGDE PLALDMESMG KGQIWINGQS 660 IGRYWTAYAH GDCNGCNYAG TFRPPKCQLG CGQPTQRWYH VPRSWLKPTQ NLLVLFEELG 720 GDPTRISLVK RSVSSVCADV TEYHPNIKNW QIESYGKAQQ LRRPKVHLRC SPGQSISFIK 780 FASFGTPLGT CGSYQQGPCH APASYAIVEK KCVGKQRCVV TIANSNFGQD PCPNVLKRLS 840 VEAVCAPISS TTAQPNWGG* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-5 | 50 | 188 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 5.0e-20 | 28 | 330 | 354 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-24 | 768 | 845 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-166 | 34 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 846 | 849 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 856 | 1 | 850 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 1 | 856 | 1 | 851 | beta-D-galactosidase [Pyrus pyrifolia] |
RefSeq | NP_568001.1 | 0 | 5 | 852 | 9 | 852 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 850 | 1 | 845 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 847 | 1 | 842 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 23 | 336 | 3 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-39 | 28 | 336 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-39 | 28 | 336 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |