| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G201600.1 |
| Family | GH5 |
| Protein Properties | Length: 1150 Molecular Weight: 129564 Isoelectric Point: 8.7418 |
| Chromosome | Chromosome/Scaffold: 07 Start: 20517853 End: 20523140 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 41 | 349 | 1e-30 |
| NGNPYFANGFNAYWLMYVASDPSQRPKVSTAFREAAAHGLTVARTWAFSDGGYRPLQYAPGSYNEQMFKGLDFVIAEARKYRIKLILSLANNYESFGGKK QYVNWARSQGQYLTSDDDFFRNPVVKGYYKNHVKTVLNRYNSFTGMHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWIMEMASHVKSIDRNHLLEAGLEG FYGQSTPQKKRLNPSLDIGTDFIANNQIPGIDFATVHSYPDQWLSSSSEQYQLSFLNNWLDAHIRDARIILRKPILLAEFGKSWKDPGFNIYQRDQLFNI VYNKIYWSA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1150 Download |
| MKLHLALGFL LAVLFNQNLL TVHVEAGDDF VRTRRVHFFL NGNPYFANGF NAYWLMYVAS 60 DPSQRPKVST AFREAAAHGL TVARTWAFSD GGYRPLQYAP GSYNEQMFKG LDFVIAEARK 120 YRIKLILSLA NNYESFGGKK QYVNWARSQG QYLTSDDDFF RNPVVKGYYK NHVKTVLNRY 180 NSFTGMHYKD DPTIMAWELM NEPRCTSDPS GRTIQAWIME MASHVKSIDR NHLLEAGLEG 240 FYGQSTPQKK RLNPSLDIGT DFIANNQIPG IDFATVHSYP DQWLSSSSEQ YQLSFLNNWL 300 DAHIRDARII LRKPILLAEF GKSWKDPGFN IYQRDQLFNI VYNKIYWSAK TGGPASGGLF 360 WQLLAGGMES FRDGYEIILS ERSSTANVIA QQSHKLDQIR KIFTRRRNVQ RWKRARAKRR 420 GGWHALLGHA CFATSSDRNM VSTIRAHNLR KLCTVPNIAF IGNKDILVSQ TTSINSFRKQ 480 HVPNAINMLE LNSLLKNLVK TGDLHEARQM FDVMPQRDEV SWTIIISGYV RAMKSSEALL 540 LFSKMWVSPG LSTDPFCLSI ALKACALEFN LNYGELLHGY LVKSGFINSV FAGSALLDMY 600 AKFGKIELGI KVFDEMPIKS VVSWTAIITG LVHGGYYKKG LVYLSEMRKS GVEYDSYTLA 660 IVLKACACLG ALNFGREIHT HTVKRGFNDT SYVANSLSTM YNKCGKLDYG LRLFDKMNTR 720 DVVSWTSIIT TYVQMREDVN AIEAFTRMQE AGVSPNEFTF AAVIASCSGL VRISWGEQLH 780 AHVLRIGLAD TLSVANSLMT MYSKCGQISS AAMVFHGMSR RDTISWSTII AVYSQGGYGE 840 EAFEHLSWMR KEGPKPTQFA FASVLSVCGN MAILEQGRQL HAHVLSIGLE QEEMIQSALV 900 NMYSKCGCIK DAEKVFNEAE NYNIVTWTAM INGYADHGYI HETINLFKML SKVGLKPDSV 960 TFIGLLTACS HAGLADLGFH YFNLMSSEYQ IRPSKEHYGC MIDLLCRAGR LTEAEEMIKS 1020 MPFHRDDVVW STLLRACRVQ GNVDCGERAA EKLLEMDPNC AGTHITLANI YSAKGKWREA 1080 ADVRKMMRTK GVMKEPGWSW IKVKDRVSAF VAGERSYPEG EEIYGMLDLL ASRVDISVQE 1140 LGSLLDLED* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03077 | PLN03077 | 2.0e-40 | 741 | 1073 | 337 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 1.0e-52 | 485 | 811 | 329 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 1.0e-72 | 491 | 966 | 484 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 1.0e-79 | 574 | 1059 | 495 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 9.0e-161 | 492 | 1128 | 640 | + Protein ECB2; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN70631.1 | 0 | 443 | 1148 | 5 | 712 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_190368.1 | 0 | 471 | 1132 | 16 | 685 | pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] |
| RefSeq | XP_002266026.1 | 0 | 443 | 1148 | 5 | 712 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310258.1 | 0 | 488 | 1146 | 1 | 659 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 26 | 399 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 1.96182e-44 | 40 | 373 | 22 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 1.96182e-44 | 40 | 373 | 22 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 1.96182e-44 | 40 | 373 | 22 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 1.96182e-44 | 40 | 373 | 22 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
