Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G205400.1 |
Family | AA1 |
Protein Properties | Length: 516 Molecular Weight: 57940.6 Isoelectric Point: 9.2809 |
Chromosome | Chromosome/Scaffold: 07 Start: 21186046 End: 21188148 |
Description | laccase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 21 | 504 | 0 |
QWHGVRQRLTCWFDGPAYITQCPIQAGQSFKYRFTLLNQRGTLFWHAHISWLRATVHGPLIIYPKQGVGYPFQPPVEEHVIILGEYWLRDVQGLERHVKE SERHVKESGGGPPGSDAYTLNGLLGPLHNCSRDDVYTINVTKGKNYLLRIINAALNMEHFFMVANHTMTVVETDGEYTKPFKTTFLMLTPGQTYNVLIKA DQSIGKYFMAMAPYMPAKNAPFLKKTSCGILRYASPTVKVDKLARKSHVKTSMTPLEPIIPNVNDTASVQAFSDQVKRLYPNHQWSPVDVPLRIDKTLFF TIGLNGPNGGIFAASVNNVTFRRPMVSLLNAYYNNLQGYYSTDFPDKPEKMYDFVNGAPNNISVDTQPAIGTQVSILEHGWAVQVIFQDTGTVGTEKHPI HLHGFSIYLLGTGLGNYNSSTALLNLYDPPYRNTVGVPVGRWAVIRFRADNPGMWFMHCHLEVHTTWGLSMAFLVKNGKGKMQN |
Full Sequence |
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Protein Sequence Length: 516 Download |
LTGSISLYYK TVQNINYSHC QWHGVRQRLT CWFDGPAYIT QCPIQAGQSF KYRFTLLNQR 60 GTLFWHAHIS WLRATVHGPL IIYPKQGVGY PFQPPVEEHV IILGEYWLRD VQGLERHVKE 120 SERHVKESGG GPPGSDAYTL NGLLGPLHNC SRDDVYTINV TKGKNYLLRI INAALNMEHF 180 FMVANHTMTV VETDGEYTKP FKTTFLMLTP GQTYNVLIKA DQSIGKYFMA MAPYMPAKNA 240 PFLKKTSCGI LRYASPTVKV DKLARKSHVK TSMTPLEPII PNVNDTASVQ AFSDQVKRLY 300 PNHQWSPVDV PLRIDKTLFF TIGLNGPNGG IFAASVNNVT FRRPMVSLLN AYYNNLQGYY 360 STDFPDKPEK MYDFVNGAPN NISVDTQPAI GTQVSILEHG WAVQVIFQDT GTVGTEKHPI 420 HLHGFSIYLL GTGLGNYNSS TALLNLYDPP YRNTVGVPVG RWAVIRFRAD NPGMWFMHCH 480 LEVHTTWGLS MAFLVKNGKG KMQNLPPPPP DLLLC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00394 | Cu-oxidase | 6.0e-40 | 97 | 253 | 157 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
PLN02191 | PLN02191 | 3.0e-45 | 21 | 493 | 506 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-55 | 22 | 493 | 498 | + oxidoreductase | ||
TIGR03388 | ascorbase | 3.0e-64 | 22 | 493 | 498 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 7 | 503 | 510 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN75876.1 | 0 | 21 | 515 | 89 | 571 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_182180.1 | 0 | 22 | 515 | 88 | 569 | LAC6 (laccase 6); laccase [Arabidopsis thaliana] |
RefSeq | XP_002264410.1 | 0 | 21 | 515 | 89 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320207.1 | 0 | 21 | 515 | 47 | 529 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523314.1 | 0 | 21 | 515 | 90 | 572 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 21 | 506 | 60 | 532 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asq_A | 0 | 21 | 506 | 60 | 532 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_B | 0 | 21 | 506 | 60 | 532 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_A | 0 | 21 | 506 | 60 | 532 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1aso_B | 0 | 21 | 506 | 60 | 532 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797675 | 497 | 21 | 500 | 0 |
EE591979 | 519 | 21 | 499 | 0 |
DV996926 | 278 | 22 | 299 | 0 |
EL350827 | 237 | 21 | 257 | 0 |
EX427222 | 335 | 34 | 356 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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