Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G209700.1 |
Family | AA1 |
Protein Properties | Length: 540 Molecular Weight: 60456.2 Isoelectric Point: 8.7663 |
Chromosome | Chromosome/Scaffold: 07 Start: 22381643 End: 22384164 |
Description | SKU5 similar 16 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 48 | 499 | 0 |
QQVILINNQFPGPPIEAVTNNNIVVNVINHLDEPFLITWHGIMQRRTSWQDGVLGTNCPIPPHSNWTYKFQVKDQIGTFMYYPSTLMHRASGGFGAFNIN QRSVISIPYPAFDEDVTLLVGDWYIKGHKALQKQLDSGLDLPLPDGLLINGVSNFTFTGQKGKTYKFRVTNVGISTSINFRIQGHPMTLVEVEGCHTLQE VYESIDIHAGQSIAVLVTLHGSVKDYFIVASTRFTKPILTTTGILLYQGSQTPPSLPLPVAPTYHVHWSMKHARTIRMNLTANAARPNPQGSFHYGAIKV VRTILLANEKVEINDKLRYAVNGISYVDPATPLKLADWFNIPGVFVLNGTKDAPPSGPPTLGVSVFGLTLHDFVEIVFQNTEKTIQSWHLDGYNFFVAGY GGGNWTTDVRRRKRYNLVDAVSRSTVQVYPKSWTSILVSLDNKGMWNLRSQT |
Full Sequence |
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Protein Sequence Length: 540 Download |
MKEATLLQFL LGIIVCSTLF FCTNAEDPYL FYTWEVTYGT RAPLGVPQQV ILINNQFPGP 60 PIEAVTNNNI VVNVINHLDE PFLITWHGIM QRRTSWQDGV LGTNCPIPPH SNWTYKFQVK 120 DQIGTFMYYP STLMHRASGG FGAFNINQRS VISIPYPAFD EDVTLLVGDW YIKGHKALQK 180 QLDSGLDLPL PDGLLINGVS NFTFTGQKGK TYKFRVTNVG ISTSINFRIQ GHPMTLVEVE 240 GCHTLQEVYE SIDIHAGQSI AVLVTLHGSV KDYFIVASTR FTKPILTTTG ILLYQGSQTP 300 PSLPLPVAPT YHVHWSMKHA RTIRMNLTAN AARPNPQGSF HYGAIKVVRT ILLANEKVEI 360 NDKLRYAVNG ISYVDPATPL KLADWFNIPG VFVLNGTKDA PPSGPPTLGV SVFGLTLHDF 420 VEIVFQNTEK TIQSWHLDGY NFFVAGYGGG NWTTDVRRRK RYNLVDAVSR STVQVYPKSW 480 TSILVSLDNK GMWNLRSQTW SKRYLGQEVY LRVWNDEKSL YTETDIPPNA LFCGKAVQS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 1 | 537 | 537 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 1 | 537 | 547 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 18 | 539 | 526 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 13 | 536 | 529 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 28 | 535 | 526 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18561.1 | 0 | 1 | 536 | 65 | 598 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_565554.1 | 0 | 16 | 536 | 16 | 535 | sks16 (SKU5 Similar 16); copper ion binding / pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002268020.1 | 0 | 1 | 536 | 131 | 664 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310164.1 | 0 | 1 | 536 | 1 | 534 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522339.1 | 0 | 1 | 536 | 1 | 537 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 539 | 6 | 544 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asq_A | 0 | 32 | 539 | 6 | 544 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_B | 0 | 32 | 539 | 6 | 544 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_A | 0 | 32 | 539 | 6 | 544 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1aso_B | 0 | 32 | 539 | 6 | 544 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |