y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G209900.1 |
Family | AA1 |
Protein Properties | Length: 540 Molecular Weight: 60173.6 Isoelectric Point: 9.8007 |
Chromosome | Chromosome/Scaffold: 07 Start: 22418224 End: 22421490 |
Description | SKU5 similar 17 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 48 | 497 | 0 |
QQVILINNQFPGPKLDVVTNNNIILNLINKLDQPFLLTWNGVKQRKNSWQDGVLGTNCPIPPNSNYTYKFQAKDQIGSYTYFPSTLMHRAAGGFGALNIY HRSVIPIPYANPDGDFTLLIGDWYKTSHKALQQTLDSGKSLPFPHGVLINGQTKTTFTGEQGKTYMFRISNVGLSTSLNFRIQGHSMKLVEVEGSHVIQN LYDSLDVHVGQSVTVLVTLNQPPKDYYIVASTRFTRTVLTATAVLHYSNSQTAVSGPLPAAPAYKYHWSMQQARTYRWNLTSNAARPNPQGSFHYGKITP TKTIVLANSASYINGKLRYAVNGVSYVNADTPLKLADYFNIPGVFSMNAVQGVPSGVAATVATSVMPTNLHDFLEVVFQNNENAMQSWHLDGYDFWVVGF GSGQWSPKKRRTYNLVDALTRHTTQVYPNSWTAILVSLDNQGMWNMRSAS |
Full Sequence |
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Protein Sequence Length: 540 Download |
MGKPVMKLHL IIGVLAVLAV SLVNAEDPYL YYTWTVTYGT RSILGAPQQV ILINNQFPGP 60 KLDVVTNNNI ILNLINKLDQ PFLLTWNGVK QRKNSWQDGV LGTNCPIPPN SNYTYKFQAK 120 DQIGSYTYFP STLMHRAAGG FGALNIYHRS VIPIPYANPD GDFTLLIGDW YKTSHKALQQ 180 TLDSGKSLPF PHGVLINGQT KTTFTGEQGK TYMFRISNVG LSTSLNFRIQ GHSMKLVEVE 240 GSHVIQNLYD SLDVHVGQSV TVLVTLNQPP KDYYIVASTR FTRTVLTATA VLHYSNSQTA 300 VSGPLPAAPA YKYHWSMQQA RTYRWNLTSN AARPNPQGSF HYGKITPTKT IVLANSASYI 360 NGKLRYAVNG VSYVNADTPL KLADYFNIPG VFSMNAVQGV PSGVAATVAT SVMPTNLHDF 420 LEVVFQNNEN AMQSWHLDGY DFWVVGFGSG QWSPKKRRTY NLVDALTRHT TQVYPNSWTA 480 ILVSLDNQGM WNMRSASWER QYLGQQFYLR VWNPVRSLAN EYDIPSNVLL CGKVVGRHP* 540 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 26 | 539 | 514 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 26 | 536 | 521 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 26 | 538 | 514 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 26 | 538 | 518 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 28 | 534 | 528 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN72538.1 | 0 | 1 | 539 | 41 | 592 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18560.1 | 0 | 1 | 539 | 1 | 535 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270831.1 | 0 | 1 | 539 | 1 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310162.1 | 0 | 1 | 538 | 1 | 537 | multicopper oxidase [Populus trichocarpa] |
RefSeq | XP_002522337.1 | 0 | 24 | 538 | 24 | 538 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 31 | 532 | 5 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asq_A | 0 | 31 | 532 | 5 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asp_B | 0 | 31 | 532 | 5 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asp_A | 0 | 31 | 532 | 5 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1aso_B | 0 | 31 | 532 | 5 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |