| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G217900.4 |
| Family | GT33 |
| Protein Properties | Length: 474 Molecular Weight: 53199.6 Isoelectric Point: 6.8642 |
| Chromosome | Chromosome/Scaffold: 07 Start: 24772825 End: 24779979 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT33 | 6 | 462 | 0 |
| RACVVVLGDLGRSPRMQYHALSLARQASLEVDIVAYGGSEPHSAVIENESIHIHTMIQWQKYSHSLPKIFYPLMLLLKPIIQFVILLWFLCFKVPHPDAF IVQNPPSVPTLVAVKWASSLRKSAFIVDWHNFGYTLLGLSVGRSSPFVSIYHWFEKHYGQMANGSLCVTRAMQHELAQNWGIRATVLYDQPPEFFCPTSL QEKHKLFCRLNRYLCHPLGVRDCVTARIGADDQNETLFTTLVDTDILLKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAALLDENDSADEGVLWKE ISGGKQYLYPRLLFIITGKGPEKEKYEEKIKRLNLKRVAFRTMWLSAEEYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIDELVKV EKNGLLFSSSSELADELLMLFRGFPNECDALKSLKNGALETGSSARWATEWEEHAKP | |||
| Full Sequence |
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| Protein Sequence Length: 474 Download |
| MGKRGRACVV VLGDLGRSPR MQYHALSLAR QASLEVDIVA YGGSEPHSAV IENESIHIHT 60 MIQWQKYSHS LPKIFYPLML LLKPIIQFVI LLWFLCFKVP HPDAFIVQNP PSVPTLVAVK 120 WASSLRKSAF IVDWHNFGYT LLGLSVGRSS PFVSIYHWFE KHYGQMANGS LCVTRAMQHE 180 LAQNWGIRAT VLYDQPPEFF CPTSLQEKHK LFCRLNRYLC HPLGVRDCVT ARIGADDQNE 240 TLFTTLVDTD ILLKPNRPAL VVSSTSWTPD EDFGILLEAA VMYDRRVAAL LDENDSADEG 300 VLWKEISGGK QYLYPRLLFI ITGKGPEKEK YEEKIKRLNL KRVAFRTMWL SAEEYPLLLG 360 SADLGVCLHT SSSGLDLPMK VVDMFGCGLP VCAVSYSCID ELVKVEKNGL LFSSSSELAD 420 ELLMLFRGFP NECDALKSLK NGALETGSSA RWATEWEEHA KPLISEVISR NLN* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 2.0e-7 | 312 | 423 | 113 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| pfam13692 | Glyco_trans_1_4 | 3.0e-8 | 257 | 427 | 171 | + Glycosyl transferases group 1. | ||
| cd03794 | GT1_wbuB_like | 2.0e-8 | 14 | 425 | 426 | + This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. | ||
| PLN02275 | PLN02275 | 0 | 1 | 426 | 429 | + transferase, transferring glycosyl groups | ||
| cd03816 | GT1_ALG1_like | 0 | 2 | 464 | 465 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19390.1 | 0 | 1 | 471 | 9 | 482 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173105.1 | 0 | 1 | 470 | 1 | 461 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283369.1 | 0 | 1 | 469 | 124 | 595 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002330745.1 | 0 | 1 | 466 | 1 | 467 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532170.1 | 0 | 1 | 473 | 1 | 476 | beta1,4 mannosyltransferase, putative [Ricinus communis] |
