Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G230000.1 |
Family | GH3 |
Protein Properties | Length: 792 Molecular Weight: 86929.9 Isoelectric Point: 6.2099 |
Chromosome | Chromosome/Scaffold: 07 Start: 28825914 End: 28830051 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 75 | 345 | 0 |
GIPRLGIPPYEWWSESLHGVASNGPGVNFNGYVKAATSFPQVLVTAASFNRTLWFKIGLAIGIEAKAMYNVGQAGLTFWAPNINIFRDPRWGRGQETPGE DPMVVSAYAIQFVKGFQGGSWRGSGELIDRFERKRALGGYNDDESGDRLMNSACCKHFIAYDLEKWKNFSRYSFNAVVTKQDMEDTYEPPFRSCIQQGKA SCLMCSYNAVNGVPACAQGDLLQKARNEWGFKGYITSDCDAVATVQEYQNYTRKADDAVALVLKAGMDINC |
Full Sequence |
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Protein Sequence Length: 792 Download |
MSLQLKSLFF ILQLLALLIS ISSSDPNPQF PCQPPHFNSY PFCNTSLSIT DRAQSLISLL 60 TLEEKIHQLS NNASGIPRLG IPPYEWWSES LHGVASNGPG VNFNGYVKAA TSFPQVLVTA 120 ASFNRTLWFK IGLAIGIEAK AMYNVGQAGL TFWAPNINIF RDPRWGRGQE TPGEDPMVVS 180 AYAIQFVKGF QGGSWRGSGE LIDRFERKRA LGGYNDDESG DRLMNSACCK HFIAYDLEKW 240 KNFSRYSFNA VVTKQDMEDT YEPPFRSCIQ QGKASCLMCS YNAVNGVPAC AQGDLLQKAR 300 NEWGFKGYIT SDCDAVATVQ EYQNYTRKAD DAVALVLKAG MDINCGSYLV RHTRTTIEEG 360 KLQDKDIDRA LLNLFSVQLR LGLFDGDPRK GQFGELGPQN ICTIEHKMLA LEAARQGIVL 420 LKNEEKFLPL NRNVVSSIAI IGPMANNISN MGGDYTGFPC DPKSFYEGLL GYVEKASYAS 480 GCSDVPCDSD AVFNDAILTA KKADFVVVVA GLDLSQETED HDRASLLLPG KQMTLVSSVA 540 AASKRPIILV LTGGGPLDVS FAEGDQNIAS ILWVGYPGEA GGKALAEVIF GDFNPGGRLP 600 MTWYPESFTK IAMNDMNMRA NPFRGYPGRT YRFYTGNRVY GFGQGLSYTK FTYKLLSAPR 660 TLSLSGSFTG TLTEKILHQG ELDYIHVDEL TSCDSLSFYV HISVANVGDR DGSHVVMLFS 720 RAPKIFEGTP EKQLIAFDRV HTSSYGSTET SIIVIPCDHL SIVDKHGKRI LPLGEHLLTL 780 GDLEHSVSIV T* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 5.0e-50 | 71 | 483 | 419 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 6.0e-56 | 61 | 370 | 340 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-58 | 418 | 649 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-78 | 111 | 740 | 675 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 25 | 789 | 769 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC41913.1 | 0 | 62 | 789 | 2 | 730 | putative beta-xylosidase [Arabidopsis thaliana] |
EMBL | CBI25718.1 | 0 | 1 | 789 | 1 | 766 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 1 | 789 | 1 | 790 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 1 | 789 | 1 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 20 | 789 | 20 | 777 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 111 | 781 | 91 | 722 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 3u48_A | 0 | 111 | 781 | 91 | 722 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 3u4a_B | 0 | 111 | 781 | 91 | 722 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 3u4a_A | 0 | 111 | 781 | 91 | 722 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2x41_A | 5e-39 | 51 | 789 | 2 | 707 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |