| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G245600.1 |
| Family | CE11 |
| Protein Properties | Length: 148 Molecular Weight: 16464.7 Isoelectric Point: 6.5017 |
| Chromosome | Chromosome/Scaffold: 07 Start: 36975668 End: 36977402 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE11 | 25 | 114 | 1.8e-27 |
| QQTLTGCIELSGKTRQSGKVSKVKIWPGFTSQGRYFEFHSNLIPASIDFVRESLLCTSLCKDGYKIRTVEHLLSALEAKGIDNCRIQIQS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 148 Download |
| MRLSATINSF KSSNLISWKT TGKLQQTLTG CIELSGKTRQ SGKVSKVKIW PGFTSQGRYF 60 EFHSNLIPAS IDFVRESLLC TSLCKDGYKI RTVEHLLSAL EAKGIDNCRI QIQSLDSEDT 120 EVEGLWDVEN DNDGQQEGCV LRVISQF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 4.0e-12 | 25 | 112 | 94 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 2.0e-17 | 25 | 112 | 93 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0774 | LpxC | 5.0e-18 | 24 | 112 | 95 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 3.0e-19 | 25 | 112 | 93 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| PRK13186 | lpxC | 2.0e-21 | 25 | 114 | 94 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26831.1 | 0 | 1 | 123 | 1 | 123 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001117351.1 | 7e-40 | 1 | 123 | 1 | 137 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173874.2 | 4e-39 | 1 | 123 | 1 | 137 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173884.5 | 7e-39 | 1 | 123 | 44 | 180 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | XP_002281269.1 | 0 | 1 | 123 | 1 | 123 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 0.0000001 | 25 | 114 | 7 | 100 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 4fw7_C | 0.0000001 | 25 | 114 | 7 | 100 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 4fw7_B | 0.0000001 | 25 | 114 | 7 | 100 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 4fw7_A | 0.0000001 | 25 | 114 | 7 | 100 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 4fw6_D | 0.0000001 | 25 | 114 | 7 | 100 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| BE053971 | 123 | 1 | 123 | 0 |
| BQ405531 | 117 | 7 | 123 | 0 |
| CU585894 | 121 | 3 | 123 | 0 |
| GW932242 | 118 | 6 | 123 | 0 |
| GW831538 | 121 | 3 | 123 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |