| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G297200.2 |
| Family | GH2 |
| Protein Properties | Length: 771 Molecular Weight: 87082.8 Isoelectric Point: 5.0623 |
| Chromosome | Chromosome/Scaffold: 07 Start: 50737097 End: 50743458 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 37 | 722 | 0 |
| PSSPWMEAVVPGTVLATLVKNKVVADPFYGLENEMIIDIADSGREYYKFWFFTKFQCKLSGAQHLDLNFRAINYSAEVYLNGHKMVLPKGMFRRHSLEVT DILNPDGENLLAVLVHPPDHPGRIPPEGGQGGDHEIGKDVATQYVEGWDWIAPVRDRNTGIWDEVSISVTGPVKIIDPHLVSSFFDQYTRAYLHATTELE NRSAWVADCSLNIQVATELEGSVCLIEHLQTQHVSVPPGARIQYTFPKLSFYKPNLWWPNGLGKQSLYNVSITVDVKGYGESDTWGHLFGFRKIESHIDR ATGGRLFKVNGQPIFIRGGNWILSDCLLRLSKERYKTDIKFHADMNLNMIRCWGGGLAERPEFYHYCDVYGLLVWQEFWITGDVDGRGIPISNPDGPLDH DLFMLCARDTVKLLRNYPSLALWVGGNEQVPPDDINTALKNDLKLHPLFESHSENALSIEEEDPSQYLDGTRVYIQGSMWDGFANGKGDFTDGPYEIQNP EDFFKDNFYNYGFNPEVGSVGMPVAATIRATMPPKGWQIPLFKKLTNGYTEEVPNPIWEYHKYIPYSKPGKVHDQIELYGIPKDLDDFCLKAQLVNYVQY RALLEGWTSRMWSKYTGVLIWKTQNPWSGLRGQFYDYLLDQTAGFYGCRCAAEPIHVQLNLATYFIEVVNTTSEELSNVAVEASVW | |||
| Full Sequence |
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| Protein Sequence Length: 771 Download |
| MAEIGKTLLE SGWLAARSTE VELTGSQLTT THPPTGPSSP WMEAVVPGTV LATLVKNKVV 60 ADPFYGLENE MIIDIADSGR EYYKFWFFTK FQCKLSGAQH LDLNFRAINY SAEVYLNGHK 120 MVLPKGMFRR HSLEVTDILN PDGENLLAVL VHPPDHPGRI PPEGGQGGDH EIGKDVATQY 180 VEGWDWIAPV RDRNTGIWDE VSISVTGPVK IIDPHLVSSF FDQYTRAYLH ATTELENRSA 240 WVADCSLNIQ VATELEGSVC LIEHLQTQHV SVPPGARIQY TFPKLSFYKP NLWWPNGLGK 300 QSLYNVSITV DVKGYGESDT WGHLFGFRKI ESHIDRATGG RLFKVNGQPI FIRGGNWILS 360 DCLLRLSKER YKTDIKFHAD MNLNMIRCWG GGLAERPEFY HYCDVYGLLV WQEFWITGDV 420 DGRGIPISNP DGPLDHDLFM LCARDTVKLL RNYPSLALWV GGNEQVPPDD INTALKNDLK 480 LHPLFESHSE NALSIEEEDP SQYLDGTRVY IQGSMWDGFA NGKGDFTDGP YEIQNPEDFF 540 KDNFYNYGFN PEVGSVGMPV AATIRATMPP KGWQIPLFKK LTNGYTEEVP NPIWEYHKYI 600 PYSKPGKVHD QIELYGIPKD LDDFCLKAQL VNYVQYRALL EGWTSRMWSK YTGVLIWKTQ 660 NPWSGLRGQF YDYLLDQTAG FYGCRCAAEP IHVQLNLATY FIEVVNTTSE ELSNVAVEAS 720 VWDLEGACPS YNVFDKLSLP PKKVMSISEL NHPKDLMSEL CSSLNFPFML * 780 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 9.0e-5 | 193 | 464 | 306 | + beta-D-galactosidase; Reviewed | ||
| pfam02837 | Glyco_hydro_2_N | 2.0e-5 | 103 | 161 | 59 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-8 | 209 | 328 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 3.0e-15 | 113 | 464 | 367 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 3.0e-34 | 43 | 464 | 431 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO27794.1 | 0 | 1 | 754 | 1 | 760 | glycosyl hydrolase [Gossypium hirsutum] |
| EMBL | CAN82620.1 | 0 | 1 | 754 | 1 | 759 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36793.1 | 0 | 1 | 754 | 1 | 759 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 1 | 754 | 1 | 759 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512381.1 | 0 | 1 | 754 | 1 | 759 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 34 | 739 | 74 | 724 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 34 | 739 | 74 | 724 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 34 | 739 | 74 | 724 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_A | 0 | 34 | 739 | 74 | 724 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x05_B | 0 | 34 | 739 | 74 | 724 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 367 | 372 | 736 | 0 |
| ES818807 | 292 | 160 | 451 | 0 |
| ES832790 | 268 | 487 | 754 | 0 |
| GO871600 | 333 | 300 | 627 | 0 |
| ES818807 | 132 | 439 | 554 | 0.00002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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