Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.007G309000.2 |
Family | CBM43 |
Protein Properties | Length: 321 Molecular Weight: 32554.6 Isoelectric Point: 7.17 |
Chromosome | Chromosome/Scaffold: 07 Start: 52261132 End: 52263245 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 146 | 225 | 3.8e-34 |
WCVAKTGTSETSLQTALDYACGIADCSQIQQGANCYNPNTLQNHASYAFNSYYQKNPLPTSCDFGGTAAIVNTNPSSGSC |
Full Sequence |
---|
Protein Sequence Length: 321 Download |
MADFVGKRLI GEEKKGFVYS RRELIGVKKT AQHDLIIPPP ATFPTPNIIN VPATNPVETP 60 AAIPATTPVT VPSTNPNNPT TVPVTNPVTT PAPITVPGAG AQQPVTNPVT TYPAPTGGVP 120 ASTPVTTNPL PPPVSTNAPA VPGQSWCVAK TGTSETSLQT ALDYACGIAD CSQIQQGANC 180 YNPNTLQNHA SYAFNSYYQK NPLPTSCDFG GTAAIVNTNP SSGSCIYPSS ASASQSTPTT 240 TPVTPSSTST GGGVPGSVVP PSVLNSSSSG SGSTTTSVFG SDIPPTVSTS MSVSVSLQPP 300 FTCIILLTMT SFVAGFIFKN * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-21 | 145 | 213 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-32 | 145 | 219 | 77 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28414.1 | 0 | 21 | 231 | 251 | 511 | unknown [Zea mays] |
EMBL | CAN65737.1 | 0 | 1 | 317 | 180 | 515 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276666.1 | 0 | 1 | 317 | 276 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 1 | 320 | 269 | 614 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512573.1 | 0 | 4 | 317 | 75 | 402 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-17 | 145 | 232 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |